LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g04777	ATGACGAGTTTTCTGATTGATTACACGAAGCAAAATGTAGAGAAATTGTTAAATGAAGCGCTGAAAGAATTACGTTATATATGTTGCTTCACTTGCATTGCTAATGATTTTGAAGAAGAAAAAGTCTGGTTGGAAGCAGAAAGGACATCTGTTGGGCAGCGTGTTAAGGTTGCAAAAAGAAGAGGAGAAGATGTTCAAGCTAATGCTCTTTTTTGGGAAGAAGAAGCTGATAAGCTCATTCGAGAAGACACCAAAACAAAACAAAAATGTTTTTTTGGATTATGTCCTCATTGCTTATGGCGATACAAAAGGGGAAAGGAACTGGAAAATAAGAAAGACCAAATAAAAAAGTTTATGGAAACTGGAAAGGAACTTGCAATCGGCCTCCCTGCTACTCTTCCAGATGTTGAACGTTATTCATCCCGACACTATATCTCTTTTAAAAGTAGAGAATCCAAATATAAAGAGCTTCTGGATGCACTGGAAGACGACACCAATTATATAATCGGGTTGCAAGGGATGGGGGGTACAGGAAAAACTACATTGGCCAAAGAAGTGGGTAAGAAACTTAAGCAATCCAAACAATTTACGTGCATTATTGATACAACAGTATCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGAATGAAATTTGATGACTGTAGTGAATCAGATAGACCCAAAAAACTATGGAAAAGATTAACTAATGGTGAAAAGATTCTTCTAATATTGGATGATGTTTGGGGAGATATTGATTTTGAAGAAATAGGGATTCCATATAGTGACAATCACAAAGGTTGTCGAGTTCTTGTAACCACGCGCAATGTGTTGGTATGCAACAGATTAGGATGCAGTAAGACAATCAGATTGGAGCTCTTATCTGAAGAAGATGCGTGGGAAATGTTCAAACATCATGCTGGTCTTACTGAAATTTCAACTCAAAGTTTGCTCGACAAGGGTCGTAAAATTGCAAATGAGTGCAAAAGATTACCAATTGCAATAGCGGCGATCGCTAGTAGTTTGAAAGGAAAACAACATCGGGAAGAATGGGACATGGCCTTAAAATCCTTGCAAAAACATGTGTCAATGCACGATGATGTTGTTGATGATGATGATTTGTTTAAAATATATGAGTGCTTGAAATTTAGCTATGATAATATGAATGATGGAAAGGCCAAAAGACTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTTCTATTGAAAGATTAATAAGACTGGGCATAGGAGCTGGCCTTTTTGGGGAAAATTATGGCAACTACGAAGATGCTCGAAGTCAAGTAGTTATATCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGGAGGTAGATCAAAAGAGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAAAGGATTGCGATTAAAGAGATCCAAACAATAAAGTTGTATGATAAAAATCAAAAGGCAATGGTTGAAAGGGAGAAGAATGTTAAATATTTGTTATGGGAAGGAAAACTAAAGAGCGTGCTTTCATGCAAGCTTGATAGTTCAAAGCTCCAAATTCTAATTGTTATCATGTATAAGGACGGTGATTTCCATAAAGAGAAAACCGAAGTCCCAGACTCATTTTTTGAAAATATTAGCGGTCTTCGATGTTTTCACTTATGTAGTGATTTTTATGGAGCAACTCTATCATTACCTCCATCAATTCAATCTTTGAAGAATATTCGATCTCTTCTTTTTAAGTGTGTTGATTTGGGTGATATCTCTATTTTCGGAAGTCTGCAAAGTCTTGAGACACTTGATTTGGATAATTGTAAAATCAATGAATTTCCAAATGAACTTGCAAAACTACACAATCTTAGATTGTTGTACTTGAAAAGTTGTGATATTATAAGGAATAATCCATTTGAAGTGATTGAAGAATGCTCCTCACTCGAAGAGTTGTATTTCATACACAGTTTTAATGATTGTTGCCAAGAAATAACCTTTCCAATGCTACAAAGATTTATAGTGGATGATGATTGGAGGTTTGTGGATGATTCACTATCAAAATGCTTGTCTATTTTACATCAAGAAAATAGAAATTTATTGTCTGAAAAAAAACTCAAGGATTGTATGCAAGCAGTAGAGGTTCTTAGACTAAGAAAACTTCGGTGGGGATGGATAAATATCATACCTGAGATTGTTTCTATGGATAATGGTATGAATGATCTCGTCGAGCTTAGATTGAGTTACATTTCACAACTTAAGTGTCTCATTGACACTAAGCGTGGAAATTCTCAAGCAACATCTGTCTTCTCCAAGTTGGTTGTATTACAATTGGAAGAAATGGAAAGTTTGGAAGAATTGTGCAATGGTCCTCTTTCTTTTGATTCATTCAAGAATTTAGAGAAGCTGACCATCAAGTATTGCAATCAGTTGCGAAGCTTATTTATGTGCAACTTAAATCTCTGCAATCTAAAGAGCTTGTTATTGATAGGATGTCCGATGTTGTTCTCTCTATTTCAACTTACTACTTCTCGTAGCCTAGTGTCATTGGAGGAATTGAAAATACTTTGGTGCAGGCATCTTGAATACATAATAACAGACGAAAGAAAAGAGAAAGAATCGAGAGGAGAAATAGTTGCTGATGATGAAAATGATAGCAAGAGGAGTCACAAATCAATGTTTCCAAAACTTAAAGATCTTAAAATTGATATGTGTTGTGGGTTAGAATTTATACTTCCATTTCTATCTATTCAGGATCTTCCGTCACTTGAATCTTTTACAATAAGTTATTGTGAGAAGCTGCAATACATATTTGGCCAATATGTACAACTTGGTTCTCTAAAACAAATGATTCTTCATTCTTTGCCCAATTTAATAAATATTTTTCCAAAATGTCATCTTACCACATCTTCTTCCATTTCTAGAGATGCCTCCAAGCCAGAAAAACAATCAGAACCTATGAAACGCACTGTCTTTTTATGGAGAGATATATGTTGCTTTGGTAAAAAAAACTGGCACAAATCCACGAGTTCTACGAGTACTGAAACCCCATTGGTTTCTGAAGATAAACAGCCGGATTGCTTAATAGCTTCGGAATCCGATTCCAATTCCTTCAAGATATGGGAACGTGTTCAATGTCTTTTGACACAATCACTCTTCATGTGGAATATTAAAGAGATTGAATTAGTTAATATTTCAAAGATAGAATCAATATTTATCCTATCTATTGCTCCAAGAATATTGTTGGAAACTTTGACAATTAGGTACTGTAATAATTTGAAGCACATAATAATAGACACCGGAGATTATGAAAGTGGTGGCAACAACTGGCACAATATCTTCCCAAAATTAAAAGAGGTCAGGGTCGAAGGTTGCATGAAGTTAAAATACATATTTGGACATTACTCGGAGGCTCATCAAAACCATAATGAGATTCACCTTTATCTTCCAGCTTTGGAACGTCTCGTTCTTAGGAATCTGCCAAAGTTAGTCACCACGTGTTCCAAACATTATCGCACAACATATCCACTTTTGGAATATCTTGTAGTTGAGAAGTGCTCACAGTTTGCTATCAAATCTATTGGCGATCTCACAATTCCTTTGGTTTCAAAATCTCTCGACACTACAATCAAGAAGCAGGAATTGAATGGGAACATGGATCATTTTCTTGCTTTAAAAAGTCTCAGGGTGTATGATTGCAAAGTAGAAAATATATATTTTCTGAATGAAGTACATGAACAACAAATGAACTTAGGTTTGCAGTACATTGAGTTGCATGATCTTCCTACGACAACTTGTTTGTTGGTTGGTCCCAAAAATTCATTTTCCCTCAATCACCTTACACGGATAAAAATCTTCCGATGCGAAAAATTGGAAATTGTGTTTTCCACTTCTCTATTAAGATGCCTACCACAATTTCTTTTTCTGAGAATACAAGAATGCAAAGAGTTGAAGCATATTATTAAAGATGATTTGAAGAATGAAAATTCCACAAATTTTCAGTCTACAAACACATACTTCCCAAAGCTAGAAATACTTTGTGTGGTAAACTGCAACAAGCTCAAATACGTCTTTCAGACTTCCGTATGCAAAGTGCTTCCAAATCTAAAGGCTCTGATGATAAGAGAATCATATGAGCTAGAAGAAATATTCAAAAGTGAAGGTGATGATCAAAATCTTGAGATTCCAAATCTGAATGTTGTAGCATTCATCAATCTGCCAAACCTCTGCAAAGATCAGGAAGTGCATTTTGAGGGTGTAAATTATCGTCTTGTACGTAATTGTCATAAACTCTCTCTGACTTCAGCGTCAAAATCCGACCGGATTGGTAACATTATTTATTTTGTTGACAAAATAGATACTGAAATCTTTATGGAATTGTCGATTCTATTGCAACCATTAAAAGAAGTGTACAAAAGCCAGTACACCTGTAATGAAAATACAAGTTCAGAAATCACTCAAGAATTTGCAGCTGGGGTTGAAGCGGAAACAACACCAGGACAGATATTGACTTCTTCACAGGTGTTGATGAATGAACAATCAATGGATCAACAACTTTTGATGAACCAACAACACTCACTTCGAGAAACTGATGATACTACCATCAAACCACAGTTGGCTGGTTCTACTACACAAGAAAAATATTTAGCAGCAAATTCGTCTTCCATTTCAGAAACAAAGAATGAGCCACCTATACAATTAGTTGCTCCTAAACAAAAGGGTATTGAAATAAGTGATGAAGAAGGAATTACATCAACTAATGTTGAGACTTTAACATCCTCAACTCATTCAAAATCAGACAGTTCATCATCACCTCATTTGGAATTAGTCAGTTCGTCATCAGATCCATTAATTACTTCTGAGTTTAAACCATCTTCAGAGAAAGATGGTGATTGCCAAATAGCCACAACCTCTTTGCCCATTGCCACTTCGGAGAAATTTTTTGAAGGTGAAGTGTCTTTGAATATATTTCCAGAGAGCAATGATGAAGTTTCTCTAAATGATGATGCTTTCATAAAAGTAATAAGCTCAAATGTTAAGGAAGAGAATCCTAAGGAGGGTGACATAGGAGTTTCCAAATCTAATCCCTCTTCTAGCATCATATCCACTATTGCATCTCAGTTTCCTTCAATTTCTTCCAAAGAAGAACCTTCTCAAATGGATGAAGATTTAAGTTCAACTTTGGCTGTCACAAGGGAGCTCGAGCAACTAGCTTCCAAGCAGCATTTGAATCACGAGAACTTATATTTGTTGAATGATTTCCTTGCCAAGCATCCTTCTCTTTGTCTAAGAGATAATTCGCTTAGTAATAGATACAAGGGCTATGCCTACAACTTACTAGCTGAGCTATTGAAATTCCTCCAAACGCACAGTGTGCTTGATGTATTGGGCTCACGCCGGTCTGAACTTGTTGAGTTATTACAAGATGTGCGCAGCTTTGCTTTTGATAAAGATTGGTTAGATGGTGTCGAAAGGCGTATTATTCATCAAGAGGCGGTTTTAAATGCCCCTATTGGCTATTAG	5532	0.3579	MTSFLIDYTKQNVEKLLNEALKELRYICCFTCIANDFEEEKVWLEAERTSVGQRVKVAKRRGEDVQANALFWEEEADKLIREDTKTKQKCFFGLCPHCLWRYKRGKELENKKDQIKKFMETGKELAIGLPATLPDVERYSSRHYISFKSRESKYKELLDALEDDTNYIIGLQGMGGTGKTTLAKEVGKKLKQSKQFTCIIDTTVSFSPDIKKIQDDIAGPLGMKFDDCSESDRPKKLWKRLTNGEKILLILDDVWGDIDFEEIGIPYSDNHKGCRVLVTTRNVLVCNRLGCSKTIRLELLSEEDAWEMFKHHAGLTEISTQSLLDKGRKIANECKRLPIAIAAIASSLKGKQHREEWDMALKSLQKHVSMHDDVVDDDDLFKIYECLKFSYDNMNDGKAKRLFLLCSVFREDEEISIERLIRLGIGAGLFGENYGNYEDARSQVVISKNKLIDSCLLLEVDQKRVKMHDLVRDAAQRIAIKEIQTIKLYDKNQKAMVEREKNVKYLLWEGKLKSVLSCKLDSSKLQILIVIMYKDGDFHKEKTEVPDSFFENISGLRCFHLCSDFYGATLSLPPSIQSLKNIRSLLFKCVDLGDISIFGSLQSLETLDLDNCKINEFPNELAKLHNLRLLYLKSCDIIRNNPFEVIEECSSLEELYFIHSFNDCCQEITFPMLQRFIVDDDWRFVDDSLSKCLSILHQENRNLLSEKKLKDCMQAVEVLRLRKLRWGWINIIPEIVSMDNGMNDLVELRLSYISQLKCLIDTKRGNSQATSVFSKLVVLQLEEMESLEELCNGPLSFDSFKNLEKLTIKYCNQLRSLFMCNLNLCNLKSLLLIGCPMLFSLFQLTTSRSLVSLEELKILWCRHLEYIITDERKEKESRGEIVADDENDSKRSHKSMFPKLKDLKIDMCCGLEFILPFLSIQDLPSLESFTISYCEKLQYIFGQYVQLGSLKQMILHSLPNLINIFPKCHLTTSSSISRDASKPEKQSEPMKRTVFLWRDICCFGKKNWHKSTSSTSTETPLVSEDKQPDCLIASESDSNSFKIWERVQCLLTQSLFMWNIKEIELVNISKIESIFILSIAPRILLETLTIRYCNNLKHIIIDTGDYESGGNNWHNIFPKLKEVRVEGCMKLKYIFGHYSEAHQNHNEIHLYLPALERLVLRNLPKLVTTCSKHYRTTYPLLEYLVVEKCSQFAIKSIGDLTIPLVSKSLDTTIKKQELNGNMDHFLALKSLRVYDCKVENIYFLNEVHEQQMNLGLQYIELHDLPTTTCLLVGPKNSFSLNHLTRIKIFRCEKLEIVFSTSLLRCLPQFLFLRIQECKELKHIIKDDLKNENSTNFQSTNTYFPKLEILCVVNCNKLKYVFQTSVCKVLPNLKALMIRESYELEEIFKSEGDDQNLEIPNLNVVAFINLPNLCKDQEVHFEGVNYRLVRNCHKLSLTSASKSDRIGNIIYFVDKIDTEIFMELSILLQPLKEVYKSQYTCNENTSSEITQEFAAGVEAETTPGQILTSSQVLMNEQSMDQQLLMNQQHSLRETDDTTIKPQLAGSTTQEKYLAANSSSISETKNEPPIQLVAPKQKGIEISDEEGITSTNVETLTSSTHSKSDSSSSPHLELVSSSSDPLITSEFKPSSEKDGDCQIATTSLPIATSEKFFEGEVSLNIFPESNDEVSLNDDAFIKVISSNVKEENPKEGDIGVSKSNPSSSIISTIASQFPSISSKEEPSQMDEDLSSTLAVTRELEQLASKQHLNHENLYLLNDFLAKHPSLCLRDNSLSNRYKGYAYNLLAELLKFLQTHSVLDVLGSRRSELVELLQDVRSFAFDKDWLDGVERRIIHQEAVLNAPIGY	1843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi3g04777	1843	Gene3D	-	133	295	IPR027417	-
	Vivi3g04777	1843	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	924	1170	-	-
	Vivi3g04777	1843	SUPERFAMILY	RNI-like	1225	1384	-	-
	Vivi3g04777	1843	SUPERFAMILY	L domain-like	466	969	-	-
	Vivi3g04777	1843	MobiDBLite	consensus disorder prediction	1536	1565	-	-
	Vivi3g04777	1843	Pfam	NB-ARC domain	155	393	IPR002182	GO:0043531
	Vivi3g04777	1843	Gene3D	Ribonuclease Inhibitor	1176	1401	IPR032675	-
	Vivi3g04777	1843	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	145	406	IPR027417	-
	Vivi3g04777	1843	PRINTS	Disease resistance protein signature	599	615	-	-
	Vivi3g04777	1843	PRINTS	Disease resistance protein signature	241	255	-	-
	Vivi3g04777	1843	PRINTS	Disease resistance protein signature	168	183	-	-
	Vivi3g04777	1843	PRINTS	Disease resistance protein signature	334	348	-	-
	Vivi3g04777	1843	MobiDBLite	consensus disorder prediction	1536	1634	-	-
	Vivi3g04777	1843	MobiDBLite	consensus disorder prediction	1582	1624	-	-
	Vivi3g04777	1843	Gene3D	-	300	389	IPR042197	-
	Vivi3g04777	1843	Gene3D	-	390	478	IPR036388	-
	Vivi3g04777	1843	FunFam	Probable disease resistance protein At1g61300	134	294	-	-
	Vivi3g04777	1843	Gene3D	Ribonuclease Inhibitor	521	680	IPR032675	-
	Vivi3g04777	1843	Gene3D	Ribonuclease Inhibitor	683	984	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g04777	Vivi-Chr3	89450408	89459950	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi3g04777	169	642	WRKY Transcription Factor Family	AT5G45050	22.368	4.62e-14	76.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g04777	-		-	vvo:131662148	3586.58