Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04774 ATGCCTATTCAAAAGGACACCAAACCAACATTTCTAACAAGTTGTTTTGGATTTTGTACTAAGTACCGGAGGATATATGAAAGGGATACGGAATTTAAAAGACTAATAAGATTCGTAGATGAAAGGGAAAAGGAGATTAAAAGAATAATGAAACATAAAGTTAAATCTGGAAATATAGGAAGTTATCCTCAGAGTCATCCAGTAATCCGATACTCTAATGTTACAAGTTACATTTCCTTTAAAAGCAGGGAGTTTGAATACAAAAATCTGTTGAATGCACTAAAAGATGAAAATAACTTTATAACGGTATTGCAAGGGATGACTGGTATTGGAAAAACTTCAATGGCCCTAGAAGTGATAAGAGAATTAGAGAAATTTGAACAATTCACCCATTTCATTTATGTGACCGTTTCATTCACTCCTAATATAAAAGAGATTAAAGATGCTATTCTTGAATCTTTTGGCTTGAATTGGAAGGACTATAGTGAATCAGACAAAACCATAAAAATATTGAATAGATTAACAAATGGAGAAAAAATTCTTTTGCTAATGGATGACATGTGGGGTCAATTCCCACTTGATTTTGAAGAAATCGGGATTCCAAATTCAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCTCGCAGTAAGCAAATATTCAACACAATGAGTTGTGTCAAGAGAATTGAACTCGACCTTTTATCCGAAGAAGATGCATGGATCATGTTTCAAAAATATTCCTGCATGGGTAATAGATGCCCAAGAGTAGTGATTAGCATTGGACGTGAAATTGCAAAGGAATGTAAACAATTACCAGCCGCAATTGCAATTATCGGTAGTAGTTTAAGAGGCCATCGAGTAATGCAAGAGTGGGCTATGAAATTACGGTCATTGAAGAAGCATGTATCCTATCACGGGGTTGATGATGATATGGTTGAACTTTATGAATGGTTGAAGGTTAGCTATGATTATATAAAAGGCGAAGAAGCCAAGGAATTGTTCCTCTTATTTTCTGTATTAGGAGAAAATGAAGAAATTTCTGTTGAAGTTCTAACCAGAATTTCCATAGGAGCGGGGCTTTTTGAGGAAGATTATCGGGCTCGTGAAAAAGTGGTTGTAGCCAAAAATAAACTGCTAGATTCTTATTTGTTATTGGGGGTCGGCCAAAAAAATGTAAAAATGCATGGTTTGGTTTGTGATATGGCTCAATGGATAAAAGAAAAAAAAGAGATTCAAAAGTCTTTGGTTGAAAGGAAAGTAAATATTCAATATTTATCATGTGAAGGGAAGGATAAGGGTTTGTTTTCCAGTAAGTTTGATGATTCCAAACTTGAGATTCTAATTGTCAAAGTGGACAGTGATAAAGACCACAAATGTATGGAAGTTCCAAATTCTTTCTTTGAAAATATGGCCAAGCTTCGAGTTTTGTGTTTTTCAGGAAATGATGATTATCCACTACTATCATTACCAAATTCAATTCAGTCATTGACAAATATTCGATCTATATTGATTAAGACTGTGGATTTAGGTGACATCTCTATCATGGGAAAACTGCAAAGTCTTGAGACTCTTGAATTGATTCAATGCACAATCAATGAACTTCCAAAAGAAATTGCAAATCTAGAGAAATTTAAATTGTTGAACTTGGAGCACTGTGTAATTAGCTCGGGTGACCCATTTGAAGTTATTAAAAGATGCTCGTCACTTGAAGGATTGTATTTCATCGATAGTTTTAATTGTTTCTGTGGAGAAATAACATTACCTCAATTGCGAAGATATCATATCTGTAAAGGGTGGGCTGTATGGAATAATTGGCTATCGAAATGTGTGGTTTTTCCTACTAATGGTGATGCATATAGGTTTTCAAAAGAAACATTCAACTATTGTATGGAAACAGCAGAGGTTCTTCTACTAAACGGAATTAAGGGGAAGTGGAGAAATCTCATGCCTGAGATTGTTCCTATAAATCTAGGTATGAATGATCTTGTTGAGCTTTGCTTGAGTTGTGTTTCGCAAATACAGCTCCTCGTTGACACGATTGGTTATCAAATGCCAAATGTCTTGTCCAAGTTGGTAGTACTAAAACTGGATAGGATGGAAAATTTGAAAGAACTATTTAATGGTGCTCTATCCGTTGATTGTTTGACGAATTTAGAGAAGGTGTCAATCAAGGACTGTAAACATCTGCGAAGTTTGTTTAAATGCAAGCTAAATCTCTTCAGTCTAAAGGTCATCGAACTGCAGAATTGCCCGATGTTAGTTTCCTTATTTTCTCAACGGCTGACTTCTGGAAGCCTGGTGCTACTAGAGACATTGAAAATAGCTCACTGCGAAAGACTGAAAAACATAATAGTAGATGAAAAGAAAGAGGAGGAATCAAGCATGGAAATGGATGACGAAGATAATAGTAACAAATATCATGGATTAATGTTTCCAAAACTAAAAGTGCTTGATATTGAAGGATGTCCCCTATTAGATTCTATATTTCCTTTTCTATTTGCTCAAGACATTCCCGTAATACAAACTATTAAAATTAAAAGATGTGATGGGTTGAAATACGTATTTGGCGTATACCAACATGTTGAATTCCGTTCACTAAGGGAATTGGAGCTCTGCCATTCACCAAATTTCACTTATATGTTTCGCGAATCTAATCATCTCATATCTTCATCTGTGAAGGGGTCAACATCTTCCATTCCATTGGTTGATGTTGAGCAGCCGCATGACAATTCATTGGCACTGGAATCCAATTCATATCGCTTTCATATATGGGAACGTACTCAATGTCTTCAAATACAGTCAATGATCCTTTACAATATTAAAAAGATTGAACTGTCTCATATCTCCAAGATAAAATCGGTATTTATCGTATCTGTCGTTCCAAAATTGTTGGTGGAAAGTTTGACAATTAGGAACTGTGATGAATTGAAGCACATAATAGACTTTGGAGATTATGACAGTGGCAGCAATAATTGGGGCAATATCTTCCCAAAATTGGAAGAGCTCTACATTGAAGGTTGCACGAAATTGAAATACATACTTGGACGCGACACTCTTGATCAAGAAAACCACATTAAGATTCTGCTTCGTCTTCCGAAATTGAAATTTCTAAGTCTTCGCAATCTTTCAAGTTTAGTCGCGATGTGTCCCAAAAAATATCGTATAAAATTTCCTCCTTCGGCAAAACTTGAACTAATAGAATGTCCTCTGGCTACTATCAAATCTATTGGTAATTTCAAAATGCACCCGGTGTCAGAATCGCTCGACAGTACAATCATAAAGGAATATGGTGATGACCAAATAGCCATACCTTCGTCTTCAAGTTCCACAAAAGAGCCACATGCTGGGAAAGTTGAAGGTTCACAGGAAACAAATCAGATTAAAAATCTAGGTTCTCTAGATGATGATGCTTTCATTAAAGTAAGCCCAACTACTAAGCAAAAGTTTCCTAAAGGTTTTCCAAATGGGACTGAAGTTGAAGCAACATCTGGATATGAAATCAACATTGAGTCAACCGAGTTTGAAATCATGGAGACAAAAAAGAAACAACCAACAAAGGGAAAGCAAGAATTTGTTGTAAACGTTTCAACATTAAAGAATCAATTTGACATGTAA 3618 0.3546 MPIQKDTKPTFLTSCFGFCTKYRRIYERDTEFKRLIRFVDEREKEIKRIMKHKVKSGNIGSYPQSHPVIRYSNVTSYISFKSREFEYKNLLNALKDENNFITVLQGMTGIGKTSMALEVIRELEKFEQFTHFIYVTVSFTPNIKEIKDAILESFGLNWKDYSESDKTIKILNRLTNGEKILLLMDDMWGQFPLDFEEIGIPNSDNHKGCRVLVTSRSKQIFNTMSCVKRIELDLLSEEDAWIMFQKYSCMGNRCPRVVISIGREIAKECKQLPAAIAIIGSSLRGHRVMQEWAMKLRSLKKHVSYHGVDDDMVELYEWLKVSYDYIKGEEAKELFLLFSVLGENEEISVEVLTRISIGAGLFEEDYRAREKVVVAKNKLLDSYLLLGVGQKNVKMHGLVCDMAQWIKEKKEIQKSLVERKVNIQYLSCEGKDKGLFSSKFDDSKLEILIVKVDSDKDHKCMEVPNSFFENMAKLRVLCFSGNDDYPLLSLPNSIQSLTNIRSILIKTVDLGDISIMGKLQSLETLELIQCTINELPKEIANLEKFKLLNLEHCVISSGDPFEVIKRCSSLEGLYFIDSFNCFCGEITLPQLRRYHICKGWAVWNNWLSKCVVFPTNGDAYRFSKETFNYCMETAEVLLLNGIKGKWRNLMPEIVPINLGMNDLVELCLSCVSQIQLLVDTIGYQMPNVLSKLVVLKLDRMENLKELFNGALSVDCLTNLEKVSIKDCKHLRSLFKCKLNLFSLKVIELQNCPMLVSLFSQRLTSGSLVLLETLKIAHCERLKNIIVDEKKEEESSMEMDDEDNSNKYHGLMFPKLKVLDIEGCPLLDSIFPFLFAQDIPVIQTIKIKRCDGLKYVFGVYQHVEFRSLRELELCHSPNFTYMFRESNHLISSSVKGSTSSIPLVDVEQPHDNSLALESNSYRFHIWERTQCLQIQSMILYNIKKIELSHISKIKSVFIVSVVPKLLVESLTIRNCDELKHIIDFGDYDSGSNNWGNIFPKLEELYIEGCTKLKYILGRDTLDQENHIKILLRLPKLKFLSLRNLSSLVAMCPKKYRIKFPPSAKLELIECPLATIKSIGNFKMHPVSESLDSTIIKEYGDDQIAIPSSSSSTKEPHAGKVEGSQETNQIKNLGSLDDDAFIKVSPTTKQKFPKGFPNGTEVEATSGYEINIESTEFEIMETKKKQPTKGKQEFVVNVSTLKNQFDM 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04774 1205 FunFam Probable disease resistance protein At1g61300 70 229 - -
Vivi3g04774 1205 PRINTS Disease resistance protein signature 101 116 - -
Vivi3g04774 1205 PRINTS Disease resistance protein signature 174 188 - -
Vivi3g04774 1205 PRINTS Disease resistance protein signature 269 283 - -
Vivi3g04774 1205 PRINTS Disease resistance protein signature 738 754 - -
Vivi3g04774 1205 Gene3D Ribonuclease Inhibitor 400 610 IPR032675 -
Vivi3g04774 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 337 IPR027417 -
Vivi3g04774 1205 Gene3D Ribonuclease Inhibitor 637 804 IPR032675 -
Vivi3g04774 1205 Gene3D - 66 231 IPR027417 -
Vivi3g04774 1205 Pfam NB-ARC domain 91 324 IPR002182 GO:0043531
Vivi3g04774 1205 SUPERFAMILY RNI-like 811 1071 - -
Vivi3g04774 1205 Gene3D Ribonuclease Inhibitor 805 1070 IPR032675 -
Vivi3g04774 1205 Gene3D - 234 326 IPR042197 -
Vivi3g04774 1205 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 842 1050 - -
Vivi3g04774 1205 MobiDBLite consensus disorder prediction 1103 1125 - -
Vivi3g04774 1205 SUPERFAMILY RNI-like 460 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04774 Vivi-Chr3 89425499 89429823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04774 106 554 WRKY Transcription Factor Family AT5G45050 20.858 9.67e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04774 - - vvo:131643001 2301.17