Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04771 ATGTCGGATTGTTTGACGGAACTGGCAAAGTCATATGTGGAGAAATTAATAAATAGAACAGCAGCAGAATTAAGGTATATTTGTTGCTTCACGTGCATTGCTAAGGATTTTGAAGAAGAAAAAACTAGGTTGGAACCAGTAAGAACAACTATCAAGCAACGCATTGATGTGGCAGTCAGAAATGGGGAAGATGTTACTGACATTGCTCGTTTTTGGGAAAAAGAAGCTGATAGGCTCATTGAAGAAGACACCAAAGCAGAACAAAAATGTTTTTTCAAACTTTGTCCTCATTGTTTTTCAAGATATAAAAGAGGAAAAGTACTGGCAAATGAGAAGGAGTATATTAAAAAATTGATAGAAGATGGAAAGACACTTCAAATTGGACTCCCTGCTATTCTTCCCGGTGTTGAACTCCATTCATCTCAAAACTATGTGTATTTTAAAAGTAGAGAATCAAAATACATAGAGCTTTTGAATGAACTCAAAGATGACAACAATTACATAATTGGACTGCAAGGAATGGGAGGCACGGGAAAAACTACATTGATCAAGGAAGTGGCTAAGGAACTTGTTAAGCAATCATCCCATTTTACTTATAGCGTTGTTACAACCGTGTCATCTTCTCCTGATATCAAAAAGATTCAAGATGATATTGCTGGATCCTTGGGATTGAATTTGGATAACTGTAATGGATCAGATCGACCCAAAAAATTATGGAGCAGATTAACCAATGGTGACAAAATTCTTCTAATACTGGATGATGTGTGGGGCTATATCAATTTTGATGAAATAGGGATTCCATACAGTGACAATCGCAAAGGGTGTAGAATTGTTATAACCACGCGTGATGTGCGAGTGTGCAAAAAATTTGTATGCAATAAGACAATCCAACTAGATCTCTTATCTGAAGAAGATGCATGGATCATGTTCAAAAGGTATGCCGATCTAAATGAAACTTCCAATAAAAACTTGCTCGACAAGGGTCGTAAAATCTCAAATGAATGCAAAAGGTTGCCTATTGCCATTGCTGTTATTGCCAGTAGTTTGAAATGTGAACAACGTCAGGATGAGTGGGATATGACCTTATATTCCTTGCAAAAGCACATGTCCATGCCCGGTGTTGAAGATGAACGTGTTGAAATTTATAAATGTTTGAAGTTTAGTTATGATAATATGAAGGATGAAAAGGAGAAGCATTTATTCCTTTTGTGTTCTTTATTTCGAGAAGACGAAGTTATTCATATTGAAAGCTTAGCTAGACTTGCCATCGGAGGAGGCCTTTTTGGAGAAGATTATGTCAGCTATGAAAATGCTCGAAGTCAAGTAGTTATATACAAAAATAAACTCGTAGATTCTTGTTTATTGTTGAAAGTTGATCATTGGGGAGTGAAAAAGCATGTCTTGGTGAAAATGCATGATTTGGTTCGCGATGCAGCTCAGTGGATAGCGAACGAAGAGATTCAAACTGTACAAGTGTATAATACAAATCAAAAGGCAATGGTGGAAAGGAAGAAAAATATTAAATATTTGTTATGTGAAGGAAAGGCAAAGGATGTGTTTTCCATGAAGCTTGATGATTCCAAGCTTGAGGTTCTGATTGTCATCATGTATCAGAGTGAAAATTCTCATACTTTAATGGGAATCGAAGTACCAGATACATTTTTTGAAAATATTAATGGACTTCGATTTTTTCAAATCACTGGTTATAATTTTTTTGGAACTCTATCATTACCTCAATCAATGCAATCGTTGAAGAATATTCGATCTATTATCCTTGAATATTTTTTTTTGTGGGACATTTCTATCTTGGAAAATTTGCGAAGTCTCGAAACACTTGATTTGGTTGGCTGTGTGATTAATGAATTGCCACATGGAATTACAAAACTAGAGAAATTAAGATTGTTGAAATTGGAACGGTGTCAGATTTTAAGGAATAATCCATTTGAAGTGATTGGAAAATGCTCATCACTTGAAGAGTTGTATTTCATACAGAGTTTTAATGAGTTTTGCCGAGAAATAAATTTCCCCAAACTGCAAAGGTTTCATGTATATCATTTTTATGCTTTTAATGATGATTCATGGTCAAAGTATGTGTCTACTGAATACAGGGATGATACTTTCCTATCTGAGACAACACTCAAGTACTGTATGCAAGAAGCCGATAGTCTCAAGCTGAAAAGAATCCAGGGAGAATGGAGAAATATCATTCCTGAGATTATTCCATTGGAACATGGTATGAATGATCTGGTTGAGCTTTCTTTAAGTTGCATTTCACAATTTAAGTGCCTCATTGACATTAGGCATACTTATTCTCCAGTATCCGATGTCTTCTCCAAGTTGGTTGTACTAACTTTGAAAAATATGGAAAATTTGGAAGAATTGTACAATGGTCCTCTTTCCCTTAACTGTTTTAAGAGTTTAGAGAAGCTATTTGTCAATGATTGCAAACACATTCGAAGCTTATTTAAGTGCAACTTAAACTTATGCAATCTAAAAGAAGTATCATTGGTGGGATGCCCAATGTTGATCTCAATATTTGAACTATCAACTGCTTGTAACCTAGAGTTGCTGGATATAACAGACTGTGAGCATCTTGAATACATAATAGTTGATGATGATAGCAAAAGTCGGGACCAAATGTTTCTGAAACTGAAATTTCTTAAAATCGAGAAGTGTCCAAAATTTGAAATAATACTTCCGTTTGTCTCTGTTGATGATCTTCCGGCACTAGAATCCATGATACTGAGAAGTTGTGATAAGGTGAAATACATATTTGGTCAAGATGTCAAGCTTGGTTCCCTAAAATTTATGGAGCTTCAGTGTGTACCCAATTTAATTGACATATTTCCAGAATGTAGTCCTACCAAGTCTTTGTCCATTAAGAGGTCATCATCCATGCCACCAACACAATCAGATCATATCAAATGCAACTTCTTTTCATTGACTGATATGTATTGTTGTGGGAAGAAATTCAGGAGTACCACAAGTACTAAAATCTCATTGGTTGATAAGAATGAGTCGCAAAACAAATTAATGGAATCAAATTCATATTGCCTAGACATAAATACATGGGAGCGTGTTCAATGTCTTTCAAGACAGTCAATGTTTTTGTGCAATGTTAAAGAGATTGAGTTGACTCAGTTGAAGAAGATAAAATCAGTATTTATCCTATCTGTTGCTCCAAAAATGTTGTTGGAAACTTTGATAATCAGGAACTGTGATGAATTGAAGCACATAATAATAGATACTGGAGATCATGACAAAGCTGATGGCAATAATTTGTGCAACGTCGTCTTTCCAAATTTGAAAAGGATTTCCATCGAAGATTGCATACAATTAGAATACATTTTTGGACACTGCATTGATGATCTTCAAAACCACACAGAGATTCATCTTCATCTTTCTACATTGGAGTATTTCTATCTTTCCAATCTACCAAGTTTAGTCGCCATATGTCCCAAACAATATCACATAACATGTTCATCTTTGGAAGAACTTGTACTCGATAACTGCATGAAAGTTGCACATATGAAGGAACTAAGTGGGAGCATGGAAAATTTGCTGACTTTGGAAAGACTTGTGATAAAAAAGTCCAATATAGAAAGTATGGTTTGTCTTAATGAAGTAAAAGAACAACGAATGAACTTAGATTTGAAACACATTAACCTGGAGGATGTTTATGTCATGTTGTGTCCTTTTTTGGGTTTCAAAAATTCTTTTTCCCTCCTGAATTTAACAAAGGTAGAAATAGTGCGATGTGAAAAATTAGAAATGATTTTTTCTAATTCTATCTTAAAATATCTACCACAACTGATTTATCTATTAATAAATGAATGTGGGGAGTTAAAGCATATCATTGAAGATGATTTGGAAAATCAAAATGTGTCAAATTCTTGGTCCTCAAGGACATGCTTCCCAAAGTTAAAAGTGCTTATTATAGAAAAGTGCAATAAGTTGAAATATGTGTTTCCAAACTCCATATGTAAAGAGTTTCCTGAGTTACAGGTTCTAATCATAAGAGAAGCAGATGAGCTAGAGGAAATATTTAAAACTTGTGAAGGTGAGAGAATTGAGAAAGTTCATACTCCAAATTTGAAATTTGTAACAATTGTGAACCTACCAAGCTTCTTCCAGACACAAGGAATTCTTTTTCAAACAGTACAATATCGTTTGGTAAAAGATTGTCATGAACTCTCTCTGACTTCAACATCAATACCTGGCTTCTTTGATATTTTTTCCAATTCCGACTTCATATCAGAGTATGGATATCTTGATAATCTGTTTCATCGATTAAGAAATGAGTACGAAAGCAACAAAGAGAGGGAAATTTTTCCCTCTAAGATTGACGATGAAGCAACATCAGAATACGAGTTGACATATCCACAGATAAGGGATGATTTTGTTGAAGAAGTTCCTAATTTAGAGATACCGTCTGTAGCAATATTGCCATCCAATTCTGAAGAGTTGATGAACCAACAACAATCACTTGGAGAATCTCATACAATTTTAGAAACAAAGAATGAGTCACCTGTTGCTCCTAAGCAAAAGGGTACTGAGATACTAGTTGATGAAGGAACTACATCAATTAATGCTAAGACAGTAACATCCTTAATTCATTCAAAATCACTCCGTTCGTCATCCGGTCCATTAGTTACTTCTGAGCATAAAACATCTCCACAAGAACATGATCCTGGCCAAATAGACTTACCTTCTTTTTCACATTCAACAACTGGGCCTCTTACCCTTGAAGATGTTGATCTTGGAGACTCACGGGAAACATCTCAGACTAATAATCAAGTCTCTCTAAATGATGATCATGCTTTGATGAAAGTAAGTTCACTTATTGAGGAACAATTTCCTAATAATAACGAAATAATAGTATCAAAATCTAAGCTCTCTCCTTTTGCATCTCAGTTTCCTTCAACACCTTCTCAAGGAGTCTCTTCTGAAATCGTAGAAGATTTTAGTTCTACTTTGCTTGTCCCGGAGGAACTTGAGCAACTAGTCTTGAAGAAACATTTGCATCATGAGAACTTGTCTTTGTTGACTGATTTCCTTGTGAAGCATCCTTCTGTTTTTTTAAGGGACACTTCACTTAGTAATAGATATAAGGGTTGTGCCTACAACTTTCTAGCTGAGCTATTGAAATTTCTGCAAACACATAGTGTGTTGGATGTGTTAGGCTCAAGTCACTCAGAATTTGTTGACTTATTGCAAGACGCACGCAGATTTCCTTTTGATAAGGAATGGTTGGATTTTGTCGAAAAGCGTGTTTTGTTTCCAGGTTTACAAGTCTCTCAAGCTGCACTGCAAAAGTTGTTGGACTCGAAACACATCTTAACTGAGCATGTGAAGGATCTGAAGCATCAATTGGCTTCCTCTGAAGCTGTTTTGGAGAGTATTGATGCGCGCTCGCGAAATGATGATAAACAGAGTCGCCACCAATATATTTATCCCAAAGAGGGAAAGGAATATCAGAAAACCTGGAATAAGGATAGGATAAGAAAAGGTCTTGCGACCAAAGATCGGGTAAGGAGTCGGTTACGCGAGGGGAAGGTACTAGCACCCCTCACGTCTGTGGTACTCCACAGGATCCACTTATGTTTGTTCTATTCTAAGGGTGTATAA 5628 0.3568 MSDCLTELAKSYVEKLINRTAAELRYICCFTCIAKDFEEEKTRLEPVRTTIKQRIDVAVRNGEDVTDIARFWEKEADRLIEEDTKAEQKCFFKLCPHCFSRYKRGKVLANEKEYIKKLIEDGKTLQIGLPAILPGVELHSSQNYVYFKSRESKYIELLNELKDDNNYIIGLQGMGGTGKTTLIKEVAKELVKQSSHFTYSVVTTVSSSPDIKKIQDDIAGSLGLNLDNCNGSDRPKKLWSRLTNGDKILLILDDVWGYINFDEIGIPYSDNRKGCRIVITTRDVRVCKKFVCNKTIQLDLLSEEDAWIMFKRYADLNETSNKNLLDKGRKISNECKRLPIAIAVIASSLKCEQRQDEWDMTLYSLQKHMSMPGVEDERVEIYKCLKFSYDNMKDEKEKHLFLLCSLFREDEVIHIESLARLAIGGGLFGEDYVSYENARSQVVIYKNKLVDSCLLLKVDHWGVKKHVLVKMHDLVRDAAQWIANEEIQTVQVYNTNQKAMVERKKNIKYLLCEGKAKDVFSMKLDDSKLEVLIVIMYQSENSHTLMGIEVPDTFFENINGLRFFQITGYNFFGTLSLPQSMQSLKNIRSIILEYFFLWDISILENLRSLETLDLVGCVINELPHGITKLEKLRLLKLERCQILRNNPFEVIGKCSSLEELYFIQSFNEFCREINFPKLQRFHVYHFYAFNDDSWSKYVSTEYRDDTFLSETTLKYCMQEADSLKLKRIQGEWRNIIPEIIPLEHGMNDLVELSLSCISQFKCLIDIRHTYSPVSDVFSKLVVLTLKNMENLEELYNGPLSLNCFKSLEKLFVNDCKHIRSLFKCNLNLCNLKEVSLVGCPMLISIFELSTACNLELLDITDCEHLEYIIVDDDSKSRDQMFLKLKFLKIEKCPKFEIILPFVSVDDLPALESMILRSCDKVKYIFGQDVKLGSLKFMELQCVPNLIDIFPECSPTKSLSIKRSSSMPPTQSDHIKCNFFSLTDMYCCGKKFRSTTSTKISLVDKNESQNKLMESNSYCLDINTWERVQCLSRQSMFLCNVKEIELTQLKKIKSVFILSVAPKMLLETLIIRNCDELKHIIIDTGDHDKADGNNLCNVVFPNLKRISIEDCIQLEYIFGHCIDDLQNHTEIHLHLSTLEYFYLSNLPSLVAICPKQYHITCSSLEELVLDNCMKVAHMKELSGSMENLLTLERLVIKKSNIESMVCLNEVKEQRMNLDLKHINLEDVYVMLCPFLGFKNSFSLLNLTKVEIVRCEKLEMIFSNSILKYLPQLIYLLINECGELKHIIEDDLENQNVSNSWSSRTCFPKLKVLIIEKCNKLKYVFPNSICKEFPELQVLIIREADELEEIFKTCEGERIEKVHTPNLKFVTIVNLPSFFQTQGILFQTVQYRLVKDCHELSLTSTSIPGFFDIFSNSDFISEYGYLDNLFHRLRNEYESNKEREIFPSKIDDEATSEYELTYPQIRDDFVEEVPNLEIPSVAILPSNSEELMNQQQSLGESHTILETKNESPVAPKQKGTEILVDEGTTSINAKTVTSLIHSKSLRSSSGPLVTSEHKTSPQEHDPGQIDLPSFSHSTTGPLTLEDVDLGDSRETSQTNNQVSLNDDHALMKVSSLIEEQFPNNNEIIVSKSKLSPFASQFPSTPSQGVSSEIVEDFSSTLLVPEELEQLVLKKHLHHENLSLLTDFLVKHPSVFLRDTSLSNRYKGCAYNFLAELLKFLQTHSVLDVLGSSHSEFVDLLQDARRFPFDKEWLDFVEKRVLFPGLQVSQAALQKLLDSKHILTEHVKDLKHQLASSEAVLESIDARSRNDDKQSRHQYIYPKEGKEYQKTWNKDRIRKGLATKDRVRSRLREGKVLAPLTSVVLHRIHLCLFYSKGV 1875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04771 1875 Coils Coil 69 89 - -
Vivi3g04771 1875 MobiDBLite consensus disorder prediction 1540 1585 - -
Vivi3g04771 1875 SUPERFAMILY L domain-like 1022 1375 - -
Vivi3g04771 1875 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1091 1365 - -
Vivi3g04771 1875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 404 IPR027417 -
Vivi3g04771 1875 Gene3D - 135 297 IPR027417 -
Vivi3g04771 1875 SUPERFAMILY L domain-like 465 948 - -
Vivi3g04771 1875 MobiDBLite consensus disorder prediction 1540 1555 - -
Vivi3g04771 1875 Gene3D Ribonuclease Inhibitor 465 716 IPR032675 -
Vivi3g04771 1875 Gene3D Ribonuclease Inhibitor 722 880 IPR032675 -
Vivi3g04771 1875 PRINTS Disease resistance protein signature 242 256 - -
Vivi3g04771 1875 PRINTS Disease resistance protein signature 168 183 - -
Vivi3g04771 1875 PRINTS Disease resistance protein signature 627 643 - -
Vivi3g04771 1875 PRINTS Disease resistance protein signature 335 349 - -
Vivi3g04771 1875 Coils Coil 1784 1804 - -
Vivi3g04771 1875 Gene3D - 300 393 IPR042197 -
Vivi3g04771 1875 Gene3D Ribonuclease Inhibitor 899 1378 IPR032675 -
Vivi3g04771 1875 FunFam Probable disease resistance protein At1g61300 136 295 - -
Vivi3g04771 1875 Pfam NB-ARC domain 155 391 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04771 Vivi-Chr3 89314908 89323612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04771 169 570 WRKY Transcription Factor Family AT5G45050 23.614 4.86e-12 69.7