Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04741 ATGGCTACTGAGCAAGATGATAGATATTCCTCCATTCAAGTACCACTTTTGAATGATGAAAAACTGAATGATTCAAATACTTTAAAAGCAGTTCATCATGTGGGCAACGCTTCTTTGTTCAAGACATGCTTTCATCTACTCAATGCTATCTCAGGAGTTGGCATTGTTTCAATACCATATGCCCTAGCATCAGGAGGATGGTTAAGCATATTTCTTCTATTTACAATAGCTCTAGCATGTTGTTACACGGGCACATTGGTTAAAAAATGCATGGACATGGATCCTAATATCAGAACCTTTCCGGACATAGGTGAACATGCGTTTGGATCGAAAGGAAGGTTATTCGTATCGATAATCATGAATTCGGAACTGTATTTAGCAGTAACCGGTTTTCTAATTTTGGAAGGTGATAATCTGAACAAACTGATACCGAATGTGGAAATTCAGATAGGAGAGTTAACAATTGGTGGGACAACATTGTTTACTATGGTTACTTGTTTGGTTATTTTGCCTACTGTTTTGTTTGAGGATATGAGTTTGTTGTCATATGTTTCTGCTGGTGGTGCTTTGGCTTCTTCGATTTTCATTGTTTCGTTGTTGTGGAATGGTGCAATTGATGGAACTGGTTTTCATGGAAAAGGAAGGGTTTTGAATTGGAGTGGAATTCCTTCGGCGGTTAGTTTGTATGCTTTCTGTTATAGTGCTCATCCTGTTCTTCCTACTCTCTACAATTCCATGAAGAACAAAAGTCATTTCTCCCGGGTCCTAATCATAAGCTTTTCAGCATGCACGTTTGGTTACGCAGCAGCAGCAATTCTAGGCTACTTAATGTTCGGACAAGAAGTCGAATCACAAGTAACTCTAAATCTCCAAACAGGAAAGTTAAGTTCAAGAGTAGCAATATACACAACCCTAGTCAATCCAATAGCAAAATACGCATTAATGCTCACACCAGTAATAAATGCAATAAAAGCAAAGGTTTCATGCAACAAAAGGGCCACGCATATGATTATTAGTACATCTTTACTAGTAAGTTCTCTTGTTATAGCAGTTACAATTCCTTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTGAGTGTCTCAGCTTCAATTTTAGTGCCATCCATTTGTTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGAAGTGGAATGATTATTAATTATTCGATAATTGTAATGGGAGTTGCTATTGCTGTTTTTGGTACTTATAGGTCTCTTGTGGATATAATTCAAAACTTGTAA 1272 0.3719 MATEQDDRYSSIQVPLLNDEKLNDSNTLKAVHHVGNASLFKTCFHLLNAISGVGIVSIPYALASGGWLSIFLLFTIALACCYTGTLVKKCMDMDPNIRTFPDIGEHAFGSKGRLFVSIIMNSELYLAVTGFLILEGDNLNKLIPNVEIQIGELTIGGTTLFTMVTCLVILPTVLFEDMSLLSYVSAGGALASSIFIVSLLWNGAIDGTGFHGKGRVLNWSGIPSAVSLYAFCYSAHPVLPTLYNSMKNKSHFSRVLIISFSACTFGYAAAAILGYLMFGQEVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKAKVSCNKRATHMIISTSLLVSSLVIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGAYKRFGSGMIINYSIIVMGVAIAVFGTYRSLVDIIQNL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04741 423 PANTHER AMINO ACID TRANSPORTER 32 413 - -
Vivi3g04741 423 Pfam Transmembrane amino acid transporter protein 36 415 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04741 Vivi-Chr3 88340301 88343606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04741 22 420 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.726 3.13e-153 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04741 K15015 - gmx:100784690 617.076