Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04734 ATGGCTTCAGCATTGGAATGTTGGTCGAGGCGCGGCAACAACAACAACGATGAAGACATGGTAGAACAAGTCCTCATGGAAACCAACCCATCTTCACACTCACAACCCAACCACAAAGACTCTTCCATTATCCACAAGAAGTTCAACAAACTCACTCGCAATGTTTCTGAAGCTATTGCTTCCCTCAAAAACACCCTCAATATTAACCTTAACCTTGATTCTTCCAAACCCGACAACAACAACAGTTCTCGTACTAGCAACAATCTCGTTTGGGGAACTGTTGTTCGAAACTTAACTCAGCTTTACCCTGGTAGCCAGCTTCCTGAGAAGCTCATGTCCAACATTCGTAAACACTATGATTCCTTGCCTCCTAGTTATTCTCAGGCGGGATTTGATGTTAAAGATGTGTTTCTTCACATCAAGTTAATTGAGCAAGCTTTGGAAGATTCACAGGCCGCGATTTTGATTGATGAGGAGTGTGATGATGAGATGCAGCTTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCGATTTCATGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGCCTTACCCTTGGAATTGTGCTTTTACTTGTTCTTTCTGGGGCTGGTCAAGATAACTTGGTAAGGACCCGGGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCTAAAGGTAGTGTTGTGAAGCTTCCTTTTGGGCTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGGGAGCTTGGAGAGATTGAAGAAGATTGTAGCGGTGTATACTGTGAAAATTCGAGTCAAAAGATTCAGCTTGAAATGCCCTTGCCTAATTCGTCCTTTCATGTATCGGTAGACGAGTGGCAGACTATTCAGACAAATGCAGATGAGATGCAAAAATGGTTGTTGAACTCGGATAGTCTTGAGTTTTTGGAACAGATTGGACAAAATTCGTATAAAGGTGCCTACATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGGTGTGATAAAGGAAACTTGTACGAGTTTGCACTCAGGAAAGACCTGCTAGAACTGATGACATGTGGACATAAAAACATTTTGCAGTTTTGCGGTGTTTGCGTAGATGACAATCACGGGTTATGTGTAGTGACAAAATTCATGGAAGGTGGATCTGTCCATGACTTAATTTCAAAGAACAAGAAGCTTCAGAACAAGGATATTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATCAAGTTTATGAATGATCACGGTGCTGCATATAGAGACCTTAATACTCAGAGGATTCTGTTGGATAGACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGCAATCAAGAGGCAATGGACTATGAAACCGATGGTTACCGATGGCTAGCTCCTGAGATAATCGCTGGCGATCCCGAGAGTGTCACCGAGACATGGATGAGTAATGTTTATAGTTTCGGGATGGTAATTTGGGAGATGGTAACCGGTGAAGCAGCCTATAATGCATATTCACCTGTACAGGCAGCAGTAGGCATTGCAGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAACTCTAAAATCTCTAATGACAAAATGCTGGAACAATACCCCTTCAAAACGCCCCGAATTCTCCGAAATTTTAGCGATATTGCTGCGAGCAACGAAACAACAACAATAG 1746 0.4347 MASALECWSRRGNNNNDEDMVEQVLMETNPSSHSQPNHKDSSIIHKKFNKLTRNVSEAIASLKNTLNINLNLDSSKPDNNNSSRTSNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLIEQALEDSQAAILIDEECDDEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGAGQDNLVRTRVESALKFAMKKPKGSVVKLPFGLCGCQEENFKGRELGEIEEDCSGVYCENSSQKIQLEMPLPNSSFHVSVDEWQTIQTNADEMQKWLLNSDSLEFLEQIGQNSYKGAYMGKKVGIEKLRGCDKGNLYEFALRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQNKDIVRIAVDVAEGIKFMNDHGAAYRDLNTQRILLDRHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYNAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPEFSEILAILLRATKQQQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04734 581 Pfam Protein tyrosine and serine/threonine kinase 362 572 IPR001245 GO:0004672|GO:0006468
Vivi3g04734 581 ProSiteProfiles Protein kinase domain profile. 323 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04734 581 SUPERFAMILY Protein kinase-like (PK-like) 295 573 IPR011009 -
Vivi3g04734 581 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 151 575 - -
Vivi3g04734 581 PRINTS Tyrosine kinase catalytic domain signature 430 448 IPR001245 GO:0004672|GO:0006468
Vivi3g04734 581 PRINTS Tyrosine kinase catalytic domain signature 394 407 IPR001245 GO:0004672|GO:0006468
Vivi3g04734 581 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Vivi3g04734 581 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Vivi3g04734 581 Gene3D Transferase(Phosphotransferase) domain 1 316 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04734 Vivi-Chr3 87947553 87950695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04734 306 579 MAP Kinase Kinase Kinase AT2G17700 34.155 7.43e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vivi3g04734 PK_Tyr_Ser-Thr 6.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04734 - - gmx:100819097 899.042