Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04733 ATGGCCTCTTCACAAATTTTGATCACTTTTCTCATCGTTCTCTTCCATTTTCAACACTCATCATCATTCTCCCTCTCGGTCGAAAAACCCCAACAAGACACTATAGTTTCACCCACAGGCACATTCACAGCAGGCTTCTACCCTGTTGGAGAAAATGCTTATTCCTTCGCCATATGGTTCACTCAAAAACATAAAAACCTCGACAAGGCCACCGTTGTTTGGATGGCAAATCGTGATCAACCAGTTAACGGGAAACGCTCAACACTTTCACTTCTTAAAACCGGCAACCTCGTCTTAACCGACGCAGGATATTCCAATGTTTGGTCCACTAACACTAACTCATCCAAACTACGTGAGTTGTTTTTGTCCGACACCGGAAATCTCATTCTCAGAGAGCGTAGCAAAAATGATTTCATTTTGTGGCAAAGCTTTGATTTCCCAACAGATACTCTCCTTCCCGATCAAAATTTCACTAGGTATATGAACCTTGTTTCCTCCAAAAGCAACAACAAATATTCCTCTGGCTTCTACAAGCTTTTTTTCGATAACGATAATCTTCTCCGTTTGCTTTACGACGGCCCAATATTTTCAAGTATTTATTGGCCATATCCTTGGCTTGTGAGTTGGGAGGCTGGTAGATCCTCATACAACAATAGTAGGGTTGCAAAATTAGATGTTTTGGGGAAATTCAGTTCTTCCGATGATTTTACTTTGATGACAAGTGATTATGGGACAGTGCTTCAACGAAGATTGACTCTTGATTTTGATGGTAATGTTCGTGCTTATAGCCGAAAACATGGAGACGAGAACTGGTCCATTTCTGGGCAATTCCACCAACAACCTTTCAAAATACATGGAATTTGTGGACCTAATAGCTTTTGCATTAACAGTCCAGAAATTGGTAGAAAGTGTTTGTGTCTTCCTGGTTTTAGTAGGATAGATGATGAAGATTGGTCGCAAGGGTGCAAACCAAACTTCCAACTTTCATGCAACAACAAAACAAGGTCAGAGACTCGCTTCCAACGCTTACCCCATGTTCAGTTTTATGGATACGACTATCACAACCAAGCAAATTATAGCTACAAACAATGTAAGCATTTATGCTTGAGAATGTCTCAATGCATAGCCTTCCGGTACCGTATGGTGAGGGACCAGGGTATGTATTATTGCTATCCCAAGACACAGTTACAAAATGGGTATAGTTCACCACATTTTGGAGGATCATTGTACTTGCGAGTGCCAAAGAGAAAACATGTTTTTTCCCATGAGAATGTTATAAAAAATGGTAGTTTGGTTTGTTCAAGACATAATGGAGTAAAACAACTAAGAAGATCATATGTCAAAGGCAATGAAAATGGATCACTGAAGTTTATGCTTTGGTTTGCTACTGGCTTGGGAGTTATTGAGGTACTGTGCTTCTTTATGGTAGGGTGCTTCTTATTTAAGAATAGAAAACACTCTAGTGTAAATAATCATGGGTATGTTTTTGCAGCAGAAATAGGGCTTAGGAAATATAGTTATTCGGAATTAAAACAAGCTACAAAAGGTTTTAGAGAAGAGATTGGAAAGGGTGCTGGAGGAACTGTTTATAAGGGTGTTTTATCGGATAATCGAGTTGTTGCGATAAAGTGTTTACATGAAACGAATCAAGGAGATAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAACCACATAAACTTGATTGAAATGTGGGGTTATTGTGCAGAAGGAAAGCATAGGTTGTTGGTTTATGAGTACATGAAAAATGGCTCTTTAGCTGAAAATCTCTCATCAAATGCACTTGATTGGGGCAAGAGGTTTAACATTGCTCTAGGCACTGCAAAGGCTCTTGCTTATTTGCATGAAGAATGTTTAGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATACTCATTGACTCTGATTACCAGCCCAAAGTAGCAGATTTTGGGTTATCTAAGCTATTACAAAGAAACAATGTTGATAACTCAAGTATTTCAAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCTATCACATCTAAGGTGGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATGATCACCGGAAAGAATACAACTACATCTATCCAAATCTCAGAAAATGGAATGGAGTCACCTAACGAGAGGTTAGTAACATGGGTGAGAGAGAAAAGAAAGACAGTTTCAGAAGTTAGATGTTGGGTTGAGCAAATAGTTGACCCTTCATTGGGATCAAATTATGACTTTGTTAAATTGGAGACTTTGGCAACGGTGGCTTTGAATTGTGTTGAGGAAGAGAAAGATGTGAGACCTACCATGAGTCAAGTTGTTGAAAGGCTCCAAAGTCATGAACATGATTCTTGA 2403 0.3924 MASSQILITFLIVLFHFQHSSSFSLSVEKPQQDTIVSPTGTFTAGFYPVGENAYSFAIWFTQKHKNLDKATVVWMANRDQPVNGKRSTLSLLKTGNLVLTDAGYSNVWSTNTNSSKLRELFLSDTGNLILRERSKNDFILWQSFDFPTDTLLPDQNFTRYMNLVSSKSNNKYSSGFYKLFFDNDNLLRLLYDGPIFSSIYWPYPWLVSWEAGRSSYNNSRVAKLDVLGKFSSSDDFTLMTSDYGTVLQRRLTLDFDGNVRAYSRKHGDENWSISGQFHQQPFKIHGICGPNSFCINSPEIGRKCLCLPGFSRIDDEDWSQGCKPNFQLSCNNKTRSETRFQRLPHVQFYGYDYHNQANYSYKQCKHLCLRMSQCIAFRYRMVRDQGMYYCYPKTQLQNGYSSPHFGGSLYLRVPKRKHVFSHENVIKNGSLVCSRHNGVKQLRRSYVKGNENGSLKFMLWFATGLGVIEVLCFFMVGCFLFKNRKHSSVNNHGYVFAAEIGLRKYSYSELKQATKGFREEIGKGAGGTVYKGVLSDNRVVAIKCLHETNQGDSEFLAEVSIIGRLNHINLIEMWGYCAEGKHRLLVYEYMKNGSLAENLSSNALDWGKRFNIALGTAKALAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNVDNSSISRMRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGKNTTTSIQISENGMESPNERLVTWVREKRKTVSEVRCWVEQIVDPSLGSNYDFVKLETLATVALNCVEEEKDVRPTMSQVVERLQSHEHDS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04733 800 ProSiteProfiles Protein kinase domain profile. 515 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04733 800 Pfam D-mannose binding lectin 71 159 IPR001480 -
Vivi3g04733 800 ProSiteProfiles Bulb-type lectin domain profile. 20 143 IPR001480 -
Vivi3g04733 800 CDD STKc_IRAK 521 794 - -
Vivi3g04733 800 CDD B_lectin 34 147 IPR001480 -
Vivi3g04733 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Vivi3g04733 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Vivi3g04733 800 Gene3D Transferase(Phosphotransferase) domain 1 590 800 - -
Vivi3g04733 800 Pfam Protein kinase domain 519 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04733 800 SMART serkin_6 515 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04733 800 Pfam S-locus glycoprotein domain 244 311 IPR000858 GO:0048544
Vivi3g04733 800 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Vivi3g04733 800 Gene3D - 26 146 IPR036426 -
Vivi3g04733 800 SUPERFAMILY Protein kinase-like (PK-like) 491 794 IPR011009 -
Vivi3g04733 800 PANTHER OS07G0415500 PROTEIN 8 796 - -
Vivi3g04733 800 CDD PAN_AP_plant 326 414 - -
Vivi3g04733 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 202 IPR036426 -
Vivi3g04733 800 ProSiteProfiles PAN/Apple domain profile. 330 414 IPR003609 -
Vivi3g04733 800 Gene3D Phosphorylase Kinase; domain 1 479 589 - -
Vivi3g04733 800 FunFam Serine/threonine-protein kinase 590 800 - -
Vivi3g04733 800 SMART blect_4 26 147 IPR001480 -
Vivi3g04733 800 FunFam S-receptor-like serine/threonine-protein kinase 483 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04733 Vivi-Chr3 87856788 87860316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04733 505 797 Trihelix Transcription Factor Family AT5G38560 41.806 6.45e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04733 Pkinase 2.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04733 - - gmx:100806357 1075.46