Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04732 ATGATCACGATGCGAATGACCTCTTCACATATCTTCATCACACTCTTCATCATCCTCTTCCATTTCCACCACTCCTCTTCATTCTCACTCTCAGTAGAAAACCCCGAAAACATTCTACTCTCACCCAAAGGCATATTCACCGCAGGCTTCTACCCTGTTGGTGAAAATGCTTATTCATTCGCTATTTGGTTCACACAAAAACATACAAATCTCAGCAATGCTACCGTTGTTTGGATGGCAAATCGTGACCAACCAGTTAACGGAAAACGCTCCACACTCTCCCTTCTCAAAACCGGCAACCTTGTCTTAACCGACGCAGGACATTCCATTGTTTGGTCCACAAACACTAACTCATCCAAGTCCAAACCACTTGAACTGTTTTTGTACGACACGGGAAATCTCGTTCTCAGAGAGCTTAACAAAAATGGTGTCATTTTGTGGCAAAGCTTTGATTTCCCAACAGATACTCTCCTTCCTGATCAAAGTTTCACTAGGTACATGAAACTTGTTTCTTCCAAAAGCGACGATAAATATTCCTCTGGCTTCTACAAGCTTTTCTTCGATAACGATAATGTTCTCCGTTTGCTTTACGATAGCCCAATACTTTCAAGTATTTATTGGCCATATCCTTGGCTTGTGAGTTGGGAGGCTGGTAGATCCACATACAACAATAGCAGGGTTGCAAAACTAGATGTTTTGGGGAAATTCAGTTCTTCTGATCATTTTACTTTGATGACAAGTGATTATGGGACAGTGCTCCAACGAAGATTAACGCTTGATTTTGATGGTAATGTTCGTGCTTATAGCCGAAAACATGGACACGAAAAGTGGTCGATTTCAGGGCAATTCCACCAACAACCTTTCAAAATACATGGAATTTGTGGGCCAAATAGCTTTGGCATAAACACTCCAGGTAATGGTAGAAAGTGTTTGTGTCTTCCTCGTTTTAGTAGGATCGACGATGAAGATTGGTCTCAAGGGTGCAAACCAAGCTTCCAACTTTCATGCAACAACAAAACAAAGTCCCAGACTTGGTTCCAACACTTACCCCATGTTGAGTTTTATGGATACGATTATGACTTCCAAGCAAATTACACCAACAAACAATGTATGCATTTCTGCTTGAGAACGTGTCACTGCGTAGCTTTCCAGTACCGGATGGTGAGCGGTATGTATAATTGCTATCTCAAGGCACAGTTACAAAATGGGTATAGTTCACCAGATTTTCGAGGATCATTATACTTGCGAGTGCCAAAGAGAAAACATGTTTTTTTCCATGAGAATGTTATACAAAACGGTAGCTTGGTTTGTTCGAGAAATGATGAAGTAAAACAACTAACAAGATCATATGTCAAAGGCAATGAAAATGGATCAGTGAAGTTTATGCTTTGGTTTGCTACTGGCTTGGGAGTAATTGAGGTATTGTGCTTCTTTATGGTAGGGTGTTTCTTATTTAAGAATAGGAAACACTCTAGTGTTGATAATCATGGGTATGTTCTTGCAGCAGAAATAGGGCTTAGGAAATTTAGTTATTCGGAATTGAAACAAGCTACAAAAGGTTTTAGCGAAGAGATTGGAAAGGGTGCTGGAGGAACTGTGTATAAGGGTGTTTTATCCGATAATCGAGCTGTTGCGATAAAGTGTTTACATGAAGCAAATCAAGGAGACAGTGAGTTTCTTGCTGAAGTTAGTATTATTGGAAGGCTTAACCACATGAATTTAATTGGGATGTTGGGCTATTGCGTCGACGGAAAGCATAGGATGTTGGTTTATGAGTACATGAAAAATGGCTCTTTAGCTGAAAATCTCTCATCAAATGCACTTAATTCGGATAAGAGGTATAACATTGCTCTGGGAACTGCAAAGGCGCTTGCTTATTTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATTCTTATTGACTCTGATTACCAACCCAAAGTAGCAGATTTTGGGTTGTCTAAGCTATTACAGAGAAACAATGTTGATAACTCAAGTATTTCAAGGATGAGGGGAACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCAATCACATCTAAGGTGGATGTATATAGCTATGGAGTTGTGGTGTTGGAGATGATTACTGGAAAGAGTCCAACTACATGTATCCAAATCCTAGAAGATGGAATAGTGTCACATAACAAGAGGTTAGTAACATGGGTTAGAGAGAAAAGAAGGACAGTTTCAGAAGTTAGATGTTGGGTTGAACAAATAGTTGACCCTTCATTGGGATCAAATTATGACATTGTTAACTTGGAGACTTTGGCAACGGTGGCTTTGGATTGTGTTGAGGAAGAGAAACATGTGAGACCTACCATGAGTCAAGTTGTTGAAAGGCTCCAAAGTCATGAGCATGATTCTTGA 2415 0.3992 MITMRMTSSHIFITLFIILFHFHHSSSFSLSVENPENILLSPKGIFTAGFYPVGENAYSFAIWFTQKHTNLSNATVVWMANRDQPVNGKRSTLSLLKTGNLVLTDAGHSIVWSTNTNSSKSKPLELFLYDTGNLVLRELNKNGVILWQSFDFPTDTLLPDQSFTRYMKLVSSKSDDKYSSGFYKLFFDNDNVLRLLYDSPILSSIYWPYPWLVSWEAGRSTYNNSRVAKLDVLGKFSSSDHFTLMTSDYGTVLQRRLTLDFDGNVRAYSRKHGHEKWSISGQFHQQPFKIHGICGPNSFGINTPGNGRKCLCLPRFSRIDDEDWSQGCKPSFQLSCNNKTKSQTWFQHLPHVEFYGYDYDFQANYTNKQCMHFCLRTCHCVAFQYRMVSGMYNCYLKAQLQNGYSSPDFRGSLYLRVPKRKHVFFHENVIQNGSLVCSRNDEVKQLTRSYVKGNENGSVKFMLWFATGLGVIEVLCFFMVGCFLFKNRKHSSVDNHGYVLAAEIGLRKFSYSELKQATKGFSEEIGKGAGGTVYKGVLSDNRAVAIKCLHEANQGDSEFLAEVSIIGRLNHMNLIGMLGYCVDGKHRMLVYEYMKNGSLAENLSSNALNSDKRYNIALGTAKALAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNVDNSSISRMRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGKSPTTCIQILEDGIVSHNKRLVTWVREKRRTVSEVRCWVEQIVDPSLGSNYDIVNLETLATVALDCVEEEKHVRPTMSQVVERLQSHEHDS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04732 804 Gene3D - 30 152 IPR036426 -
Vivi3g04732 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 208 IPR036426 -
Vivi3g04732 804 SUPERFAMILY Protein kinase-like (PK-like) 499 798 IPR011009 -
Vivi3g04732 804 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Vivi3g04732 804 Pfam Protein kinase domain 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04732 804 FunFam Putative receptor protein kinase ZmPK1 21 152 - -
Vivi3g04732 804 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Vivi3g04732 804 Pfam D-mannose binding lectin 75 165 IPR001480 -
Vivi3g04732 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Vivi3g04732 804 CDD B_lectin 39 153 IPR001480 -
Vivi3g04732 804 SMART serkin_6 519 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04732 804 PANTHER OS07G0415500 PROTEIN 13 800 - -
Vivi3g04732 804 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04732 804 SMART blect_4 27 153 IPR001480 -
Vivi3g04732 804 FunFam S-receptor-like serine/threonine-protein kinase 487 593 - -
Vivi3g04732 804 Pfam PAN-like domain 341 398 IPR003609 -
Vivi3g04732 804 Gene3D Transferase(Phosphotransferase) domain 1 594 804 - -
Vivi3g04732 804 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
Vivi3g04732 804 FunFam Putative receptor-like protein kinase 594 804 - -
Vivi3g04732 804 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Vivi3g04732 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Vivi3g04732 804 CDD PAN_AP_plant 332 418 - -
Vivi3g04732 804 CDD STKc_IRAK 525 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04732 Vivi-Chr3 87852150 87854779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04732 509 802 Trihelix Transcription Factor Family AT5G38560 42.333 2.97e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04732 Pkinase 2.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04732 - - gmx:100806357 1054.66