Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04728 ATGAATCCCAACCACCATAATTCTCGGTTCAATTTTATCCAAAATGGTGGCATCCCTCCTCTTATTCCAAATCATCAAAATAATCCACAATTTGGAAATTATCCATATCATACATCCCACTCTCCATATCATACATCACATTCTCCATATCAATATCAACAATTTTCATCCCAAACAACTAATCCCATTATGCCTCGTGAAGTTGGTATTGGTACTAGTGGTGTGCAATCAAATGATCAAGAGTCTGAAATACCACAATTTTGCACTCAAGATAGTTTGAAAACTATCAACCTTGATGAAGATGTTGGAACCACATCGGTTGTAAATATACCGAAAACAAGATTTCAACCAAAGGAGGATGAGCTTCTCATTCAGTCATGGCTCAACGTTTCAAAGGATCCAATTGTTGGGGTTGATAAAAAAGGAGACAGATTTTGGAAGAGAATTGGTGAAGCTTATAATAAACATCGCGGCAAGATTTTTCAAGAGAGGAAACCATTGACATTAAAAGGTCGATGGCACAAAAAGATTAACCCCTCTGTTAATAAATTTGTTGGGTGCTACAAGCAAGCCATGAATTTAAAAAAAAGTGGGAGCTCCGAGATCAACATCATTTCAGCTGCATATGACATTTATTACCAAGATGAGCGTGAAAAATTTACATTCGAGAGTGCATGGAGATTATTGAAAGATGAACCCAAATGGCTTGCAGGTTCATCAGAACCTTCTGCAAAAAGAACAAAGAATTCGGCTTCTGGAGCATATTCTTCATCTTCTAACCCTCCAACACCAACAAGCAACGAAGACAATTCACCATCACCTTCTTCGTTACGTAGACCAATCGGTCAAAAGGCAGCAAAAAGAAAGGAGAAAGAAAAGCTAGTGGAAAGATCAACATCCGATGTCAAATTTAATACTTTACAAGACGACTTCCAAAAGAAAAATGAGTTGATGTCACAATTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAGTTGAGATAGAGAAGAAAAGAATCGATGCAGAGAAACATAAGGCTGAGAGAGATATGGTAAGATTGAAGATCAATGATTTGCAAATACTTTCAAAAGATACATCATACATGGATTCAAGACAATTGCAAGCTCACGAGTTATTATGTGACGTGATTAGAAGAGAATATGGGCTTAATTAG 1176 0.369 MNPNHHNSRFNFIQNGGIPPLIPNHQNNPQFGNYPYHTSHSPYHTSHSPYQYQQFSSQTTNPIMPREVGIGTSGVQSNDQESEIPQFCTQDSLKTINLDEDVGTTSVVNIPKTRFQPKEDELLIQSWLNVSKDPIVGVDKKGDRFWKRIGEAYNKHRGKIFQERKPLTLKGRWHKKINPSVNKFVGCYKQAMNLKKSGSSEINIISAAYDIYYQDEREKFTFESAWRLLKDEPKWLAGSSEPSAKRTKNSASGAYSSSSNPPTPTSNEDNSPSPSSLRRPIGQKAAKRKEKEKLVERSTSDVKFNTLQDDFQKKNELMSQFARDYARIESEKVEIEKKRIDAEKHKAERDMVRLKINDLQILSKDTSYMDSRQLQAHELLCDVIRREYGLN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04728 391 MobiDBLite consensus disorder prediction 283 299 - -
Vivi3g04728 391 PANTHER - 85 385 - -
Vivi3g04728 391 Coils Coil 318 357 - -
Vivi3g04728 391 MobiDBLite consensus disorder prediction 237 299 - -
Vivi3g04728 391 Pfam No apical meristem-associated C-terminal domain 219 373 IPR029466 -
Vivi3g04728 391 MobiDBLite consensus disorder prediction 242 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04728 Vivi-Chr3 87786082 87787257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04728 112 292 Glutathione S-transferase Gene Family AT5G41240 37.824 3.82e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04728 - - vvo:131596124 593.964