Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04725 ATGGGTTTAACAAACCGCATGTTATCATGGAATGAACAAGACAAATCCATGCTTCAAACCGTTCTTGGTCCTCCAGCTTTTTATTTTGTCATAACTAATTGTTTATCCAATGAAAATGTCTTAATCGCTATTGGTGGTAGTGCTGCAACTGGTGCTGATTCTCTTCAAAACAAACTCTCTGATCTTGTTGAAAACTCATCAACTTTCAATTGGAACTACGCTATTTTCTGGCAACTTTCTCAATCAAAATCTGGTGATTACATTCTTGGTTGGGGCGATGGATGTTGCAGAGATCCACACGAAGATGAACAACCAGAGACCTTTCAAAGATATGAAGAAAAAAAGGTTGAGCAGAATATGGGGAACAAGGTTTTACAGAAGCCACATAAAACTTTTGGTGGTTCTGATGAAGACAATTACATAATCAAAACACTTACCGGGTCCACCATACCTTGA 456 0.3816 MGLTNRMLSWNEQDKSMLQTVLGPPAFYFVITNCLSNENVLIAIGGSAATGADSLQNKLSDLVENSSTFNWNYAIFWQLSQSKSGDYILGWGDGCCRDPHEDEQPETFQRYEEKKVEQNMGNKVLQKPHKTFGGSDEDNYIIKTLTGSTIP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04725 151 PANTHER MYC 50 134 IPR045084 GO:0003700|GO:0006355
Vivi3g04725 151 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 137 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04725 Vivi-Chr3 87766053 87766508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04725 8 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 48.175 5.21e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04725 - - vvo:131658472 314.309