Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04702 ATGGGTTTAACAAACCGCATGTTATCATGGAATGAACAAGACAAATCCATGCTTCAAACTGTTCTTGGTCCTCCAGCTTTTTATTTTGTCATAACTAATTGTTTATCCAATGAAAATGTCTTAATCGCTATTGGTGGTAGTGCTGCAACTGGTGCTGATTCTCTTCAAAACAAACTCTCTGATCTTGTTGAAAACTCATCAACTTTCAATTGGAACTACGCTATTTTCTGGCAACTTTCTCAATCAAAATCTGGTGATTACATTCTTGGTTGGGGCGATGGATGTTGCAGAGATCCACACGAAGAAGAACAACCAGAGACCTTTCAAAGATATGAAGAAAAAAAGGTTGAGCAGAATATGGGAAACAAGGTTTTACAGAAGCCACATAAAGCTTTTGGTGGTTCTGATGAAGACAATTACATAATCAAAACACTTACCGGGTCCACCATACCTTGA 456 0.3794 MGLTNRMLSWNEQDKSMLQTVLGPPAFYFVITNCLSNENVLIAIGGSAATGADSLQNKLSDLVENSSTFNWNYAIFWQLSQSKSGDYILGWGDGCCRDPHEEEQPETFQRYEEKKVEQNMGNKVLQKPHKAFGGSDEDNYIIKTLTGSTIP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04702 151 PANTHER MYC 50 136 IPR045084 GO:0003700|GO:0006355
Vivi3g04702 151 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 137 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04702 Vivi-Chr3 87322293 87322748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04702 8 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 46.853 7.78e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04702 - - vvo:131658472 317.005