Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04698 ATGTCAAAGACAGTTTGCGTGACGGGAGCCAGCGGAGCCATCGGATCATGGGTTGTCCGCCTCCTCCTCGAACGCGGCCACACCGTCCACGCCACCATCCAAGATCTCGAGGATGAGAACGAGACGAAACATTTGGAAGCCATGGAAGGAGCAGAAAGTCGTCTCCGATTCTTCGAAATGGATCTTCTAAACAGCGATTCCATCGCCGCTGCCGTGAAAGGTTGTGCCGGAGTTATTCATCTTGCATGTCCAAACATTATTGGTGAAGTCAAAGATCCGGAGAAGCAGATTTTGGAACCGGCAATTCAGGGAACGGTGAACGTGTTGAAGGTGGCCAAGGAAGCTGGAGTGGAGCGTGTGGTGGCGACGTCGTCGATCTCCGCCATCATACCGAGTCCTAATTGGCCGGCAGATAAGGTTAAGGGAGAGGACTGTTGGACTGATCTTGACTATTGTAAGGAAAAGAAGTTATACTACCCCATAGCAAAGACATTAGCAGAAAAAGCTGGTTGGGATTTTGCTAAGGAGACAGGTTTCGATGTGGTAATGATTAATCCTGGGACAGCTTTGGGCCCTTTGATTCCACCAAGAATTAATTCAAGCATGGCTGTTCTTGCTGGTGTTCTCAAAGGTGACAAAGAAACATATGAGGACTTCTTCATGGGAATGGCCCATTTTAAAGACATAGCATTGGCACATATTTTGGCATTTGAACAAAAGAAAGCCTCTGGAAGACATTTGTGTGTGGAAGCTATTCGTCATTATGGTGATTTTGTGGCATTGGTTGCGGAGTTATACCCTGAATACAATGTAGCAACGTTGCCAAAGGATACAAACCCTGGATTGTTGAGAGCAAAGAATGCATCAAAGAAGTTGATTGATTTAGGTTTAGAGTTCACTCCAGCTGAACAAATTATCAAGGATGCTGTTGAGTCTTTGAAGAGTAGAGGTTTTGTATAA 960 0.4583 MSKTVCVTGASGAIGSWVVRLLLERGHTVHATIQDLEDENETKHLEAMEGAESRLRFFEMDLLNSDSIAAAVKGCAGVIHLACPNIIGEVKDPEKQILEPAIQGTVNVLKVAKEAGVERVVATSSISAIIPSPNWPADKVKGEDCWTDLDYCKEKKLYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHILAFEQKKASGRHLCVEAIRHYGDFVALVAELYPEYNVATLPKDTNPGLLRAKNASKKLIDLGLEFTPAEQIIKDAVESLKSRGFV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04698 319 Gene3D - 1 319 - -
Vivi3g04698 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Vivi3g04698 319 CDD FR_SDR_e 5 297 - -
Vivi3g04698 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Vivi3g04698 319 Pfam NAD dependent epimerase/dehydratase family 5 239 IPR001509 -
Vivi3g04698 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04698 Vivi-Chr3 87244412 87247959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04698 3 319 Monolignol Biosynthesis Gene Families AT5G58490 65.615 4.95e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04698 - - gmx:100806281 548.895