Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04697 ATGATGCGAATGGCCTCTTCACAAATCTTGATCACTTTTCTCATCGTTCTCTTCCATTTTCAACACTCATCATCATTCTCCCTCTCTGTGGAAAAACCCCAGCAAGATATTATAGTTTCACCCACAGGCACATTCACAGCAGGCTTCTACCCTGTTGGAGAAAATGCTTATTCCTTCGCCATATGGTTCACTCAAAAACATAAAAACCTCGACAAGGCCACCGTTGTTTGGATGGCAAATCGTGATCAACCAGTTAACGGGAAACGCTCAACACTTTCCCTTCTTAAAACTGGCAACCTCGTCTTAAGTGACGCAGGATATTCCAATGTTTGGTCCACTAACACTAACTCATCCAAACTACTTGAGTTGTTTTTGTCCGACACCGGAAATCTCATTCTCAGAGAGCGTAGTAAAAATGATTCCATTTTGTGGCAAAGCTTTGATTTCCCAACAGATACCCTCCTTCCTGATCAAAAATTTTCAGGGTACATGAACCTTGTTTCATCCAAAAGCGGCACCAACTATTCCTCGGGCTTCTACAAGCTATTTTTCGACTCAACCGATTTTCTCATACTTCTCTACGGTGGCCCTTTGTATTCAACTATATATTGGGATAGGTCCTATAGTTGGGATACTAGTAGGTCATACAATAACAGCAGGGTTGCGAAACTAGGTGTTTTGGGCGATTTCATTTCTTTTAATGGTTATACTTTAATGACAAGTGATTATGGGACAGTGCTCCAACGAAGATTGACCCTTGATTTTGATGGTAATGTTCGTGTTTATAGCCGAAAACATGGACAAGAGAAGTGGTCAATTTCAGGGCAATTTCACCAACAACCTATAAAAATATATGGAATCTGTGGACCTAATAGCTTTTGCATTAACAATCCAAGAAATGGTAGAAAGTGTTTGTGTATTCCGGGTTATAGTAGGATTGATAGTCAAGATTGGTCTCAAGGGTGCAAACCAAGCTTCCAACTTTCATGCAACAACAAAACAAAGTCCGAGACTCGCTTCCAACACTTACCCCATGTTCAATTTCAGGAAGACAATTCATACGGGAATGCCTATTATTACTACCAGGCAAATTACACCTATAAACAATGCAAGCATCTCTGCTTGAGAATGTGCCAATGCATAGCTTTCGAGTACCGTTTGGCACAGGACGGGGAGGTTAGCTATGATTGCTACGTGAAGACACAGTTACAAAACGGGTATAGTTCACCAGATTTCCAAGGATCAACATTCTTGCGATTGCCAAAAAGAAAACATGTTTTTCTCAGTGAGAATGTTGTAAAAAACGATAGCTTGGTTTATTCGAGAGATAATGGAGTAAAACAACTAAGAAGATCATATGTGGAAGGCAAAGAAAATGGACTAGTCAAGTTTATGCTTTGGTTTGCTACCGGTTTAGGAGTAATTGAGGTGTTGTGCTTCTTTATGGTAGGGTGCTTCTTATTTAAGAATAGGAAACCTTCTAGTGTAGCTAATCATGAGAACATTCTTGCAGCAGCAATAGGGTTTAGGAATTTCAGTTATTGGGAATTGAAACAAGCTACAGCAGATTTTAGTCAAGAGATTGGAAGAGGTGCTGGTGGAACTGTGTATAAGGGTGTTTTATCCGATAATCGAGTTGTTGCGATAAAGTGTTTACATGAAACGAATCAAGGAGATAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCAGAAGGAGAGCATAGGTTGTTGGTTTATGAGTACATGAAAAATGGCTCTTTAGCTGAAAATCTCTCATCAAATGCACTTGATTGGGGCAAGAGGTTTAACATTGCTCTAGGAACTGCAAAGGCTCTTGCTTATTTGCATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATTCTTATTGACTCTGATTACCAACCCAAAGTAGCAGATTTTGGGTTATCTAAGCTATTACAAAGAAACAATGTTGATAACTCAAGTATTTCAAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCTATCACATCAAAGGTGGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATGATTACCGGAAAGAATACAACTACATCTATCCAAATCTCAGAAAATGGAATGGAGTCACCTAACGAGAGGTTAGTAACATGGGTGAGAGAGAAAAGAAAGACGGTTTCAGAAGTTAGATGTTGGGTTGAACAAATAGTTGATCCTTCATTGGGATCAAATTATGACATTGTTAAATTGGAGACTTTGGCAACGGTGGCTTTGGATTGTGTTGAGGAAGAGAAAGATGTGAGACCTACCATGAGTCAAGTTGTTGAAAGGCTCCAAAGTCATGAACATGATTCTTGA 2424 0.3956 MMRMASSQILITFLIVLFHFQHSSSFSLSVEKPQQDIIVSPTGTFTAGFYPVGENAYSFAIWFTQKHKNLDKATVVWMANRDQPVNGKRSTLSLLKTGNLVLSDAGYSNVWSTNTNSSKLLELFLSDTGNLILRERSKNDSILWQSFDFPTDTLLPDQKFSGYMNLVSSKSGTNYSSGFYKLFFDSTDFLILLYGGPLYSTIYWDRSYSWDTSRSYNNSRVAKLGVLGDFISFNGYTLMTSDYGTVLQRRLTLDFDGNVRVYSRKHGQEKWSISGQFHQQPIKIYGICGPNSFCINNPRNGRKCLCIPGYSRIDSQDWSQGCKPSFQLSCNNKTKSETRFQHLPHVQFQEDNSYGNAYYYYQANYTYKQCKHLCLRMCQCIAFEYRLAQDGEVSYDCYVKTQLQNGYSSPDFQGSTFLRLPKRKHVFLSENVVKNDSLVYSRDNGVKQLRRSYVEGKENGLVKFMLWFATGLGVIEVLCFFMVGCFLFKNRKPSSVANHENILAAAIGFRNFSYWELKQATADFSQEIGRGAGGTVYKGVLSDNRVVAIKCLHETNQGDSEFLAEVSIIGRLNHMNLIEMWGYCAEGEHRLLVYEYMKNGSLAENLSSNALDWGKRFNIALGTAKALAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNVDNSSISRMRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGKNTTTSIQISENGMESPNERLVTWVREKRKTVSEVRCWVEQIVDPSLGSNYDIVKLETLATVALDCVEEEKDVRPTMSQVVERLQSHEHDS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04697 807 Pfam Protein kinase domain 525 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04697 807 FunFam S-receptor-like serine/threonine-protein kinase 490 596 - -
Vivi3g04697 807 FunFam Serine/threonine-protein kinase 597 807 - -
Vivi3g04697 807 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Vivi3g04697 807 Gene3D Transferase(Phosphotransferase) domain 1 597 807 - -
Vivi3g04697 807 Pfam D-mannose binding lectin 74 161 IPR001480 -
Vivi3g04697 807 Gene3D Phosphorylase Kinase; domain 1 488 596 - -
Vivi3g04697 807 SMART serkin_6 522 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04697 807 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Vivi3g04697 807 Gene3D - 27 148 IPR036426 -
Vivi3g04697 807 FunFam Putative receptor protein kinase ZmPK1 19 149 - -
Vivi3g04697 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Vivi3g04697 807 CDD B_lectin 38 150 IPR001480 -
Vivi3g04697 807 PANTHER OS07G0415500 PROTEIN 9 803 - -
Vivi3g04697 807 ProSiteProfiles PAN/Apple domain profile. 330 421 IPR003609 -
Vivi3g04697 807 Pfam S-locus glycoprotein domain 246 311 IPR000858 GO:0048544
Vivi3g04697 807 SMART blect_4 27 150 IPR001480 -
Vivi3g04697 807 SUPERFAMILY Protein kinase-like (PK-like) 501 801 IPR011009 -
Vivi3g04697 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Vivi3g04697 807 ProSiteProfiles Protein kinase domain profile. 522 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04697 807 CDD STKc_IRAK 528 801 - -
Vivi3g04697 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 164 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04697 Vivi-Chr3 87207138 87209900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04697 512 804 Trihelix Transcription Factor Family AT5G38560 41.806 1.19e-63 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04697 Pkinase 8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04697 - - gmx:100806357 995.727