Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04692 ATGTCTCCTTCACCATTACAAATCTTCATCACAATCTTCATCATCCTCTTCCATTTCCATCACTCCTCATCATTCTCCCTCTCGGTAGAAAACCCCGAACATAACTTCATACTCTCACCCAATCACACATTCACCGCAGGCTTCTACCCCGTAGGTGAAAATGCTTATTCATTCGCCATTTGGTTCACACAAAAACAAAAACACCTTGACAACAACAACAACACCGCCACCGTTATTTGGATGGCAAATCGTGACCAACCCGTCAACGGAAAACACTCAACACTTTCTATTCTCAAAACCGGCAACCTCATCTTAACCGATGCAGCCCAATCCATCGTTTGGTCCACAGACACCGCCTCATCAAAACCACTAAAATTACTCTTACATGACACCGGTAACCTCGTTCTTCATGAACTAAACACAAACACAAACTGTTCCAGCAATAACATTCTATGGAAAAGCTTTGACTCCCCAACTGATACACTTCTACCAGACCAAACTCTAACGAGATTCACCAGCCTCGTTTCATCAAGAAGCAAAACAAATCACTCATCGGGTTTCTACAAACTCTTCTTTGATAATGACAACATTCTTCGTCTTCTTTATGAAGGTCCAAGAGTTTCGAGCATTTTTTGGCCAGATCCTTGGGCTACAAGCAACGGTGCTGCTGGAAGTGGTAGCAGATCAACTTACAACAGTAGCAGAATTGCTTCTTTGGATTCATTTGGTAGCTTTAGTTCTTCAGATAATTTCGTTTTCAATACTTCTGACTATGGAACATTGTTGCAACGTAGACTTACACTCGACCATGATGGTAACGTTCGCGTTTATAGCAGAAAAGATGAGATACAAAGTTGGTTTGTTTCCGGCCAATTTAAACAACGATCTTGTTTCATTCATGGGATTTGTGGACCGAATAGTACTTGCAGTAATGATCCGATGAATGGTAGAAAGTGTTCTTGTTTACCTGGTTATGTTTGGATTAATAATCAAGATAATTCTCAAGGTTGCAGACCCAATTTTACACTTTCATGCAGTAACATGACTCATCATGATGAGTTAAGGTTTTTGGCTTTACCTCATGTAGATTTTTATGGATATGATTATGGCTTCTATGAGAATAAAACTTACAAAGAATGTGAGGATCTGTGTTCACACTTGTGTGATTGTGCTGGATTTCAGTATACGTTTTTCTTTACAGCTGATAAGGGTGGTTATTATTTGTGTTTTCCGAAGATCCAGTTACTTAATGGCCATCGTTCACAGAATTTTCAATCATTATTCTACTTGAAATTGCCAAAAAGTAGTGATTTTGTTGATGGGGTTAAGAATCAACAAAATGGGAAGGGAATGGTTTGTTCAAGGAATAGGGTGGTAAAGCTTGAGCGAGGATACATAGAAGAGAAAGAAAATGGTTCCTTGAAGTTCATGCTTTGGTTTGCTGGTGGCTTAGGAGGAGTTGAACTCTTGGGATTTTTTCTGGTGTGTTTTTTCTTGTTTAGGGGTAGCAAAGATTCTAGTGAGGATAGTAACGGATATGTTTTAGCAACAGCAAGGTTTAGGAAATTTAGTTACTCTGAATTGAAACGAGCTACGGAAGATTTTAGTGAAGAGATTGGAAGAGGTGCTGGAGGATCTGTGTATAAAGGTGTTTTATCCAATAATCGAGTCGCTGCGATAAAGCGTCTGCATGAAGCAAATCAAGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAAGCTTAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTCATCAAATGAACTTGATTGGGGTAAAAGGTATAACATTGCTATGGGAACTGCAAAGGGTCTTGCTTATTTACATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATACTTGTTGACTCTGATTACCAACCTAAGGTAGCAGATTTTGGTTTGTCTAAGCTATTGAATAGGGATGACCTTGGTAATTCAAAATTTTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGGAAATCACATCAAAGGTGGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATGATTACTGGAAAGAGTCCAACAACTGGTATACAAATCAAAGAAGAGTTGTGTCATGAGAGATTGGTAACATGGGTTAGGGAAAAAAAGAGAAAAGGATTAGAAGTTGGTTGTTGGGTAGAACAAATTGTGGACCCGACAATGGAAGCAAATTATGATGTTAAGAAAATGGAGACTTTGGCAAATGTTGCTTTGGATTGTGTAGCAGATGATAAAGATGTTAGGCCCACCATGAGTCAAGTTGTTGAGAGACTTCTATGTCATGAGCATAATTATTGA 2454 0.3908 MSPSPLQIFITIFIILFHFHHSSSFSLSVENPEHNFILSPNHTFTAGFYPVGENAYSFAIWFTQKQKHLDNNNNTATVIWMANRDQPVNGKHSTLSILKTGNLILTDAAQSIVWSTDTASSKPLKLLLHDTGNLVLHELNTNTNCSSNNILWKSFDSPTDTLLPDQTLTRFTSLVSSRSKTNHSSGFYKLFFDNDNILRLLYEGPRVSSIFWPDPWATSNGAAGSGSRSTYNSSRIASLDSFGSFSSSDNFVFNTSDYGTLLQRRLTLDHDGNVRVYSRKDEIQSWFVSGQFKQRSCFIHGICGPNSTCSNDPMNGRKCSCLPGYVWINNQDNSQGCRPNFTLSCSNMTHHDELRFLALPHVDFYGYDYGFYENKTYKECEDLCSHLCDCAGFQYTFFFTADKGGYYLCFPKIQLLNGHRSQNFQSLFYLKLPKSSDFVDGVKNQQNGKGMVCSRNRVVKLERGYIEEKENGSLKFMLWFAGGLGGVELLGFFLVCFFLFRGSKDSSEDSNGYVLATARFRKFSYSELKRATEDFSEEIGRGAGGSVYKGVLSNNRVAAIKRLHEANQGESESEFLAEVSIIGKLNHMNLIEMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLGNSKFSRIRGTRGYMAPEWVFNLEITSKVDVYSYGVVVLEMITGKSPTTGIQIKEELCHERLVTWVREKKRKGLEVGCWVEQIVDPTMEANYDVKKMETLANVALDCVADDKDVRPTMSQVVERLLCHEHNY 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04692 817 Gene3D - 158 286 IPR036426 -
Vivi3g04692 817 Gene3D Transferase(Phosphotransferase) domain 1 610 816 - -
Vivi3g04692 817 Pfam Protein kinase domain 536 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04692 817 Pfam D-mannose binding lectin 77 170 IPR001480 -
Vivi3g04692 817 CDD STKc_IRAK 539 810 - -
Vivi3g04692 817 Gene3D Phosphorylase Kinase; domain 1 501 609 - -
Vivi3g04692 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 206 IPR036426 -
Vivi3g04692 817 FunFam S-receptor-like serine/threonine-protein kinase 502 609 - -
Vivi3g04692 817 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Vivi3g04692 817 ProSiteProfiles Bulb-type lectin domain profile. 22 149 IPR001480 -
Vivi3g04692 817 ProSiteProfiles Protein kinase domain profile. 533 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04692 817 CDD EGF 297 325 - -
Vivi3g04692 817 Gene3D - 28 156 IPR036426 -
Vivi3g04692 817 PANTHER OS07G0415500 PROTEIN 10 810 - -
Vivi3g04692 817 CDD B_lectin 35 158 IPR001480 -
Vivi3g04692 817 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Vivi3g04692 817 Pfam S-locus glycoprotein domain 253 326 IPR000858 GO:0048544
Vivi3g04692 817 SMART blect_4 28 158 IPR001480 -
Vivi3g04692 817 FunFam Putative receptor-like protein kinase 610 816 - -
Vivi3g04692 817 PIRSF SRK 2 816 IPR024171 GO:0004674
Vivi3g04692 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Vivi3g04692 817 SMART serkin_6 533 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04692 Vivi-Chr3 87066567 87069680 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04692 523 810 Trihelix Transcription Factor Family AT5G38560 41.638 5.17e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04692 Pkinase 8.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04692 - - gmx:100806357 1008.82