Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04690 ATGTCTCCTTCACCATTACAAATCTTCATCACTCTCATTATCATCCTCTTCCATTTCCATCACTCCTCATCATTCTCCCTCTCAGTAGAAAACCCCCAACAAAACATCATACTCTCACCCAACCACACCTTCACCGCAGGCTTCTACCCCGTAGGTGAAAATGCTTATTCATTCGCCATTTGGTTCACGCAAAAATACAAACACCTTGACAACAACGCCACCATTGTTTGGATGGCAAATCGTGACAAACCCGTTAACGGAAAACACTCAACACTTTCTATTCTCAAAACTGGGAACCTTATCTTAACGGATGCAGCTCAATCCAACGTTTGGTCTACAGACACCACCTCATTAAAACCACTCCAATTACTCTTACATGACACCGGTAACCTCATTCTTCAAGAACTAAACACAAACACAAACTGTTCCAGCAATAATATTTTATGGCAAAGCTTCGATTCCCCAACAAATACACTTCTACCAGACCAAACTCTAACGAGATTCACCAGCCTCGTTTCATCAAGAAGCGAAACAAATCAGTCATCTGGTTTCTACAAACTCTTCTTCGATGATGACAACATTCTTCGTCTTCGTTATGAAGGTCCAAGAGTTTCGAGCATTTTTTGGCCGGATCCTTGGGTTACTAGCAACGGTGCTGCTGGTAGTGGTAGCAGATCAACTTTCAACAGTAGCAGAATCGCTTCTTTGGATTCATTTGGTAGGTTTAGTTCCTCTGATAATTTCGTTTTCAATGCTTCTGATTATGGAACATTGTTGCAACGTAGACTTACACTTGACCATGATGGGAACGTTCGTATTTATAGCAGAAAAGACGAGGAACAAAGCTGGTTTGTTTCCGGGCAATTTAAACAACAACCTTGTTTCATTCATGGGATTTGTGGACCGAATAGTACTTGTTGTAATGATCCAATCAATGGTAGAAAGTGTTCTTGTTTACCTGGTTATGTTTGGGTTAATGATCGAGATTATAGTCAAGGTTGCAGACCTAATTTTCAGCTTTCATGCAGTAACAAGACTAATGAGTCAAGGTTTTTGGCTTTACCTCATGTTGATTTTTATGGATATGATTATGGGTTCTTTGTGAATAAAACTTACAAAGAATGTGAGGATATGTGTTCGCAGTTGTGTGGTTGTGCTGGATTTCAGTATACTTTTGAAGCTGAATACGGTGGTAATTATTGGTGTTTTCCGAAGATTCAGTTACTTAATGGCAATCGTTTACCGAGTTTTCGAGGATCGTTCTACTTGAAATTGCCAAAAAATAGTGGTTTTGTTGATCAGATGAAGATTCAACAAAATGGGATGGGAATGGTTTGTTCAACAAAAGGACTAGTAGAGCTTGAGCGAGAATACATAAAAGGGAAAGAAAATGGTTCCTTGAAGTTCATGCTTTGGTTTGCTGGTGGTTTAGGTGGAGTTGAGCTCTTGGGATTTTTTCTGGTGTGGGTTTTCTTGTTTAGAAGCAAGAAATCTGATGAAGATAATAACAGGCATATTCTAGCAGCAGCAGGGTTTAGGAAATTTAGTTACTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATTGGAAGAGGTGCTGGTGGAAGCGTCTATAGGGCTGTTTTATCTGATAATCGTGTTGCTGCGATAAAGCGTCTGCATGTAGCAAATCGTGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAATCACATAAATTTGATTGGAATGTGGGGTTATTGTGCAGAGGGGAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAACGGTACTTTAGCTGAAAATCTCTCTTCAAATGCACTTGATTGGGATAAGAGGTATAACATTGCTCTAGGAACTGCAAAGGCTCTTGCTTATTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATTCTTATTGACTCTGATTACCAACCTAAGGTAGCAGATTTTGGTTTGTCTAAGTTATTGAATAGGGATGGCCTTGATAATTCAAATATCTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCAGATCACTTCTAAGGTGGATGTTTATAGCTATGGAGTTGTGGTGTTGGAAATGATTACTGGAAAGAGTCCAACAACTGGTATACAGACCAAAGAAGAGTTGTGTCATGAGAGATTGGTAACATGGGTTAGGGAAAAAAAGAGAAAAGGATTAGAAATTGGTTGTTGGGTAGAACAAATTGTTGATCCTAGATTAGGATTCAACTATGATGTTAAGCAAATGGAGACTTTGGCAAATGTTGCTTTGGATTGTATAGCAGATGATAAAGATGTTAGGCCCACCATGAGACAAGTTGTTGAGAGGCTTCTAAGTCATGGCTCATGA 2424 0.394 MSPSPLQIFITLIIILFHFHHSSSFSLSVENPQQNIILSPNHTFTAGFYPVGENAYSFAIWFTQKYKHLDNNATIVWMANRDKPVNGKHSTLSILKTGNLILTDAAQSNVWSTDTTSLKPLQLLLHDTGNLILQELNTNTNCSSNNILWQSFDSPTNTLLPDQTLTRFTSLVSSRSETNQSSGFYKLFFDDDNILRLRYEGPRVSSIFWPDPWVTSNGAAGSGSRSTFNSSRIASLDSFGRFSSSDNFVFNASDYGTLLQRRLTLDHDGNVRIYSRKDEEQSWFVSGQFKQQPCFIHGICGPNSTCCNDPINGRKCSCLPGYVWVNDRDYSQGCRPNFQLSCSNKTNESRFLALPHVDFYGYDYGFFVNKTYKECEDMCSQLCGCAGFQYTFEAEYGGNYWCFPKIQLLNGNRLPSFRGSFYLKLPKNSGFVDQMKIQQNGMGMVCSTKGLVELEREYIKGKENGSLKFMLWFAGGLGGVELLGFFLVWVFLFRSKKSDEDNNRHILAAAGFRKFSYSELKQATKGFSQEIGRGAGGSVYRAVLSDNRVAAIKRLHVANRGESESEFLAEVSIIGRLNHINLIGMWGYCAEGKHRLLVYEYMENGTLAENLSSNALDWDKRYNIALGTAKALAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLNRDGLDNSNISRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPTTGIQTKEELCHERLVTWVREKKRKGLEIGCWVEQIVDPRLGFNYDVKQMETLANVALDCIADDKDVRPTMRQVVERLLSHGS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04690 807 Gene3D - 26 154 IPR036426 -
Vivi3g04690 807 Gene3D Phosphorylase Kinase; domain 1 491 601 - -
Vivi3g04690 807 ProSiteProfiles Bulb-type lectin domain profile. 22 146 IPR001480 -
Vivi3g04690 807 Gene3D - 155 284 IPR036426 -
Vivi3g04690 807 CDD EGF 293 322 - -
Vivi3g04690 807 CDD B_lectin 37 155 IPR001480 -
Vivi3g04690 807 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04690 807 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Vivi3g04690 807 PANTHER OS07G0415500 PROTEIN 10 804 - -
Vivi3g04690 807 FunFam Serine/threonine-protein kinase 602 807 - -
Vivi3g04690 807 CDD PAN_AP_plant 338 426 - -
Vivi3g04690 807 Pfam Protein kinase domain 528 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04690 807 Pfam S-locus glycoprotein domain 256 323 IPR000858 GO:0048544
Vivi3g04690 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Vivi3g04690 807 Gene3D Transferase(Phosphotransferase) domain 1 602 806 - -
Vivi3g04690 807 CDD STKc_IRAK 531 802 - -
Vivi3g04690 807 FunFam S-receptor-like serine/threonine-protein kinase 494 601 - -
Vivi3g04690 807 ProSiteProfiles Protein kinase domain profile. 525 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04690 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 208 IPR036426 -
Vivi3g04690 807 Pfam D-mannose binding lectin 74 167 IPR001480 -
Vivi3g04690 807 SUPERFAMILY Protein kinase-like (PK-like) 505 802 IPR011009 -
Vivi3g04690 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Vivi3g04690 807 SMART blect_4 28 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04690 Vivi-Chr3 86944553 86947241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04690 515 802 Trihelix Transcription Factor Family AT5G38560 42.321 1.90e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04690 Pkinase 1.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04690 - - gmx:100806357 1040.02