Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04689 ATGTCTCCTTCACCATCCCATTTCTTCATCACAGTCCTCATCATCCTCTTCAATTTCCACCACTCCTCTTCATTCTCTCTCTCAGTAGAAAACCCTGACCAAAACTTCATACTCTCACCCAAACGCACATTCACCGCAGGCTTCTACCCCGTAGGTGACAATGCTTATTCATTCGCCATTTGGTTCACGCAAAAACACAAACACCTTAACAGCAACAACAACAACTACAACGCCACCGTTGTTTGGATGGCAAACCGTGACCAACCAGTAAACGGAAAACGCTCAACGCTTTCTATTCTCAAAACCGGCAACCTCGTCTTAACGGATGCAGCTCAATCTAATATTTGGTCTACAGACACTACCTCATCAAAACCACTTCAATTACTCTTACATGACACCGGTAACCTCGTTCTTCAAGAACTAAACACAAACGGTTCCATCAATAGCAATAGCAATAGCACTCTATGGCAAAGCTTCGATTTCCCAACAGATACACTTCTCCCAGACCAACCCCTCACCAGATTCACCAAACTCGTTTCATCTCGAAGCGAAACAAATCACTCATCTGGTTTCTACAAACTCTTTTTCGACAACGACAACGTTCTTCGTCTTCTATACGAAGGTCCAAGAGTTTCAAGTGTTTTTTGGCCGGATCCTTGGGTTACTAGCAACGGTGCTGCTGGTAGTGGTAGCAGATCAACTTTCAACAGTAGCAGAATCGCTTCTTTGGATTCATTTGGTAGGTTTAGTTCCTCTGATAATTTCGTTTTCAATGCTTCTGATTATGGAACATTGTTGCAACGTAGACTTACACTTGACCATGATGGGAATGTTCGCATTTATAGTAGAATAGACGAGGAACAAAGTTGGTTTGTTTCTGGTCAATTTAAACAACAACCTTGTTTCGTTCATGGGATTTGTGGACCGAATAGTACTTGTAGTAATGATCCGGTGAATGGTAGAAAGTGTTCTTGTTTACCTGGTTATGTTTGGATTAATGATCAAGATAATTATCAAGGTTGCAGACCTAATTTTCAGCTTTCTTGCAGTAACAAGACTAGTGAGTCAAGGTTTTTGGCTTTACCTCATGTTGATTTTTATGGATATGATTATGGTTTCTTTGTGAATAAAACTTACAAAGAATGTGAGGATCTGTGTTTGCAATTCTGTGGTTGTGCTGGATTTCAGTATACTTTTAACGCTGAATATGGTGGTAATTATTGGTGTTATCCGAAGATTCAGTTACTTAATGGCCATCATTCACAGAGTTTTCTAGGATCATTCTACTTGAAATTGCCAAAAAATAGTGATTTTGTTGATCAGATGAAGATTCAACAAAATGGGATGGGAATGGTTTGTTCAACAAAAGGAGTAGTAGAGCTTGAGCGAGAATACATAAAAGAGAAAGAAAATGGTTCCTTGAAGTTCATGCTTTGGTTTGCTGGTGCTTTAGGTGGAGTTGAGCTCTTGGGATTTTTTCTGGTGTGGTTTTTCTTGTTTAGAAGTAGCAGAAACTCTGATGAAGACAATAATGGGTATATTCTAGCAGCAGGGTTTAGGAAATTTAGTTTCTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATTGGAAGAGGTGCTGGAGGAAGCGTCTATCAGGCTGTTTTATCTGATAATCGAGTCGCTGCGATAAAGCGTCTGCATGAAGCAAATAACGGAGAGAGTGAGAGTGAGTTTCTTGCTGAGGTTAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGAATGTGGGGTTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTCATCAAATGAACTTGATTGGGGTAAAAGGTATAACATTGCTATGGGAACTGCAAAGGGTCTTGCTTATTTACATGAGGAGTGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATTCTTATTGACTCTGATTACCAACCTAAGGTAGCAGATTTTGGTTTGTCTAAGCTATTGAATAGGGATGACCTTGATAATTCAAATTTCTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCAGAGTGGGTTTTCAACTTGCAAATCACATCTAAGGTTGATGTTTATAGCTATGGAGTTGTGGTGTTGGAAATGATTACTGGAAAGAGTCCAACAACTGGTATACAGATCAAAGAAGAGTTGTGTCATGAGAGGTTGGTAACATGGGTCAGGGAGAAAAGGAGAAATGGATTAGAAGTTGGTTGTTGGGTAGAACAAATTGTTGATCCTAAATTAGGATCAAATTATGATGTTAAGAAAATGGAGACTTTGGCAAATGTTGCTTTGGATTGTGTAGCAGATGATAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGACTTCTAAGTCATGAGCATAATTATTGA 2451 0.3937 MSPSPSHFFITVLIILFNFHHSSSFSLSVENPDQNFILSPKRTFTAGFYPVGDNAYSFAIWFTQKHKHLNSNNNNYNATVVWMANRDQPVNGKRSTLSILKTGNLVLTDAAQSNIWSTDTTSSKPLQLLLHDTGNLVLQELNTNGSINSNSNSTLWQSFDFPTDTLLPDQPLTRFTKLVSSRSETNHSSGFYKLFFDNDNVLRLLYEGPRVSSVFWPDPWVTSNGAAGSGSRSTFNSSRIASLDSFGRFSSSDNFVFNASDYGTLLQRRLTLDHDGNVRIYSRIDEEQSWFVSGQFKQQPCFVHGICGPNSTCSNDPVNGRKCSCLPGYVWINDQDNYQGCRPNFQLSCSNKTSESRFLALPHVDFYGYDYGFFVNKTYKECEDLCLQFCGCAGFQYTFNAEYGGNYWCYPKIQLLNGHHSQSFLGSFYLKLPKNSDFVDQMKIQQNGMGMVCSTKGVVELEREYIKEKENGSLKFMLWFAGALGGVELLGFFLVWFFLFRSSRNSDEDNNGYILAAGFRKFSFSELKQATKGFSQEIGRGAGGSVYQAVLSDNRVAAIKRLHEANNGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLNRDDLDNSNFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPTTGIQIKEELCHERLVTWVREKRRNGLEVGCWVEQIVDPKLGSNYDVKKMETLANVALDCVADDKDVRPTMSQVVERLLSHEHNY 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04689 816 FunFam Serine/threonine-protein kinase 609 816 - -
Vivi3g04689 816 CDD EGF 300 329 - -
Vivi3g04689 816 FunFam S-receptor-like serine/threonine-protein kinase 501 608 - -
Vivi3g04689 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Vivi3g04689 816 Gene3D Transferase(Phosphotransferase) domain 1 609 816 - -
Vivi3g04689 816 Gene3D - 161 290 IPR036426 -
Vivi3g04689 816 Pfam D-mannose binding lectin 79 174 IPR001480 -
Vivi3g04689 816 SUPERFAMILY Protein kinase-like (PK-like) 513 810 IPR011009 -
Vivi3g04689 816 SMART serkin_6 532 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04689 816 CDD B_lectin 35 162 IPR001480 -
Vivi3g04689 816 Gene3D - 28 160 IPR036426 -
Vivi3g04689 816 ProSiteProfiles Protein kinase domain profile. 532 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04689 816 Pfam Protein kinase domain 535 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04689 816 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Vivi3g04689 816 PANTHER OS07G0415500 PROTEIN 10 811 - -
Vivi3g04689 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 216 IPR036426 -
Vivi3g04689 816 CDD STKc_IRAK 538 809 - -
Vivi3g04689 816 SMART blect_4 28 162 IPR001480 -
Vivi3g04689 816 CDD PAN_AP_plant 345 433 - -
Vivi3g04689 816 ProSiteProfiles Bulb-type lectin domain profile. 22 151 IPR001480 -
Vivi3g04689 816 Pfam S-locus glycoprotein domain 263 330 IPR000858 GO:0048544
Vivi3g04689 816 PIRSF SRK 2 815 IPR024171 GO:0004674
Vivi3g04689 816 Gene3D Phosphorylase Kinase; domain 1 499 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04689 Vivi-Chr3 86929583 86932353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04689 522 809 Trihelix Transcription Factor Family AT5G38560 42.321 2.60e-66 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g04689 Pkinase 2.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04689 - - gmx:100806357 1069.68