Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04681 ATGACTCGGAAATTCCCTGTAAATGGTTTCTTACAATCCCCAAATTATGAATGGCAACAACAACAACAACATCAACATTCTATTCCTTCTCGTATTCTACAAGAAAAAATGGTGAAAAATACTAATGGTACAACATTTTCTTCCTATGAAATTCTGTGTCAAATTCAACCAAACACTCACCCTTCTGGTATTTTCTATGGTGACAACCCCTTAACTCATGCATTCTCACTGCTCTTGTTTCACCTCATTCTTGTCTCTGCCATCACACGTATTGTCCGTTTCGTTCTTAAGCCTCTCAAACAACCTAACATCGTTTGTCAAATTATTGGTGGTGTGATTATTGGACCTTCATTTCTAGGAAGAAGTAAATGGTATCATCGAAGCATAAAGCCGGAAGCGGCGCAATTCCTAATGAGCAACCTAGGTGTGATGGGGTTCATGTTTTTTGTTTTTGTCTATGGTGTGAAAATGGATCCAAGTTTATTGAGAAAATCAGGAAAAATGCATATATCAATTGCATTGACAAGCATAACAATTCCAACAATAGCAGTGTTTGTTATAGGACTATGTTTAAGAAAAATGATGGACAAAGAGCTAGGTTCAGTTTCATCCATAGGAGTATTATCAGGGTACTTAGGAATAACAGCATTTCCTGTTCTATATCATATTCTCAAAGAGCTTAACCTTCTAAACTCGGACGTGGGACGATTCGCGTTAGCGACAGCGTTAATCAGCGACGCGTTTGGAATTCTTAGTGTTTTAGCATTTGAAGCATCACAACAAGGAGAAACAAGAGCTGAGAATGCTTTGTGGTATTTGCTTTCCATTGTGGTCATATTTGCAGTTTTAATGGGTTGTTTAAGGCCAATAATGCTATGGATAAATCATAGAACACCAGAAGGACAACAAATTGATCAATCTTTGGTGGTTGCAATTATTTTAGGTGTTTTTGTGATGGCATTTATAACTGACATGTTTGGTATAGCAATTGTAAATGGGCCTTTGTGGTTGGGCTTGGCAATTCCTGATGGGCCTGGTTTAGGAGCAACATTGGTGCACAAAACTGAGACTATTATGAATGAGTTACTTATGCCGTTTTCATTCATTTTGATTGGGCACTATACTGATTTTTTTGCATTGGCTACTTTTGATTTTAAAAACTTGAAAGCTTTGTTTCTCATGGTTTTGACTGGTTACTTGTTGAAATTCTTTGTTACTTGGATGGCTACAATGTATTGGCGCATGCCTTTTAGAGATGGTTTAACTTTTAGCCTCATTATGAGCTTAAGAGGACAAATTGAATTCATCTTGTTTGTGCATTTGATAGACAAAAAGATCTTGAATGTACCAGAATTCACAATGTTGGTGATTGTGACAACAGCATTGACAGCAACATTCACTCCACTAATCTCCATATTATATGATCCAACAAGACCCTACATGTTAAACCAAAGGAGAAACCTTCAACACAATCCACCAAGTGAAGAACTTAGAATAATTTTATGTATTCTAGACACAGAAAGCACAAATGGACTCATTCATCTACTTGATGTCACAAATCCAACCTCAAACAACCCACTTTCAGTTTCTTCTCTTAGACTATTCGAGCTTGCTGGTCGCGCTACGCCATTATTGATCGATCACACGAAACAAGAAGTTCCTCAGATATATAGATGGACACACACCATAAATGCGCTTCGAAGTTACCAACAAATGAAACAAGAGTTTATGAAAATCCAGTTCTTCACTGGCGTGGCTCCCAAGCAATCAATGTTTCAAACCATCTGCGAACTCTCCCTCGAACAAGAAGCGTCGTTGATCATTCTACCTTTCATAAATAGAGGCTTTTATTATCATGGAGTAAGAAGGACATTGAATTCACAGGTGTTGGAAAATGCTCCTTGCTCTATTGCAATTCTTGTTGATAAAGGTCTTCTTGAAAGTACCATGCCTACGACCGGGAATTCGATGAGGCTTAATACGCAACGATTTGCCGTGTTGTTTCTCGGAGGAGCAGATGCGAGAGAAGCACTTGTTTACGCGGATAGAATGGTCGCGAACGAGGAAGTATCGCTCACGGTGATAAGGTTTCTGTCATACAACAATATAGGAGACAATGAAATGGAGAAGAAGCTTGATGATGGAATAGTGACATCCTTTTGGGTGAAGAATGAGAGGAATCAAAGAGTGGTGTACAAAGAGGTTGTGGTTAAGAATGGTGAAGAAACAATAGGAGCAATTCATGATATGAATGATGGTGCTTTTGACCTATTGATAGTTGGAAGGAAACAAGGGATAAACCCTAATATTCTTACAGGGTTATCAGAATGGAGTCAAAGTGATGAGTTAGGGCTCATTGGTGATTATGTTAGTTCTCAAGATTTTATTGGCTCAGCTTCTGTTTTAGTGGTGCAACAACAAGTCCTAAGAGGTTAA 2436 0.383 MTRKFPVNGFLQSPNYEWQQQQQHQHSIPSRILQEKMVKNTNGTTFSSYEILCQIQPNTHPSGIFYGDNPLTHAFSLLLFHLILVSAITRIVRFVLKPLKQPNIVCQIIGGVIIGPSFLGRSKWYHRSIKPEAAQFLMSNLGVMGFMFFVFVYGVKMDPSLLRKSGKMHISIALTSITIPTIAVFVIGLCLRKMMDKELGSVSSIGVLSGYLGITAFPVLYHILKELNLLNSDVGRFALATALISDAFGILSVLAFEASQQGETRAENALWYLLSIVVIFAVLMGCLRPIMLWINHRTPEGQQIDQSLVVAIILGVFVMAFITDMFGIAIVNGPLWLGLAIPDGPGLGATLVHKTETIMNELLMPFSFILIGHYTDFFALATFDFKNLKALFLMVLTGYLLKFFVTWMATMYWRMPFRDGLTFSLIMSLRGQIEFILFVHLIDKKILNVPEFTMLVIVTTALTATFTPLISILYDPTRPYMLNQRRNLQHNPPSEELRIILCILDTESTNGLIHLLDVTNPTSNNPLSVSSLRLFELAGRATPLLIDHTKQEVPQIYRWTHTINALRSYQQMKQEFMKIQFFTGVAPKQSMFQTICELSLEQEASLIILPFINRGFYYHGVRRTLNSQVLENAPCSIAILVDKGLLESTMPTTGNSMRLNTQRFAVLFLGGADAREALVYADRMVANEEVSLTVIRFLSYNNIGDNEMEKKLDDGIVTSFWVKNERNQRVVYKEVVVKNGEETIGAIHDMNDGAFDLLIVGRKQGINPNILTGLSEWSQSDELGLIGDYVSSQDFIGSASVLVVQQQVLRG 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04681 811 Pfam Sodium/hydrogen exchanger family 83 469 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04681 811 Gene3D - 76 478 IPR038770 -
Vivi3g04681 811 PANTHER CATION/H + ANTIPORTER 44 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04681 Vivi-Chr3 86558157 86561195 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04681 1 808 Antiporter Super Family AT5G58460 40.190 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04681 K26731 - gmx:100783296 993.801