Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04679 ATGTCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCGCGCCACATAGCAAAAACGCTAGGCCACAACAACAACAATATGGCCGATGATATTCTTCAAATATTCTCTAACTTCGACGGTAGATTCTCCAAAGAGAATCTATCGAACGAAGGTGTAGGGAATGATTCCCTACGCTGCGCTGCACTTGAACAAACTATTAACTCTCTCCACCGTCGGATTTCGAATCATCTCTCGTCGGAGGATTTTATCTGTTATAACTCCGCCACGTTTCTCGCCGCCGTTGACGAGCTTGTTTCTATTATCGAAGACTGGAGTCCTCTTTCCGATGATAAATCCGTCGGCGCGTGTCTTATCCGCGCCGATGATATACTCCAGCAAGCCATGTTTCGTGCGGAGGAAGAGTTTCGATCACTCATGGAACTCGGAGGCGAGTCGTTTGACCTGACTCGGAGTAAGGAGAAGTCAACTCTGTATGACTCGAACGAGGACGAGGATGATGAAGAAGAACTTGACGGTGAAGTTGACGGAGAGGATGACGTGATTCCGGTGGCGAAGGCGGTTGTTGATTACAACGTGGTGATTGACGCGCTTCCGCCTGCGACGGTGAACGGACTCAGGGAAATCGCGAAGCGTATGTTAGCGGCAGGGTTTGGGAAGGAGTGTTCGCACGTGTACGGAGTTTGCAGGAGGGAGTTCTTGGAAGAGAGTTTATCGAGGTTAGGGTTACAGAAATTGAGTATCTCAGAGGTTCATAAGATGCCATGGCAGGAGCTTGAAGACGAGATTGAACGATGGATTAAAGCCTCTAACGTTGCTCTTAAAATCCTCTTTCCGAGCGAGCGACGTCTCGGCGATCGTGTTTTCTCCGGTTTGTCGTCTTCGTCTGCAGTTGCTGATCTCTCCTTCATGGAGGTCTGTCGCGGATCAGCGATTCAGTTGCTGAATTTCGCAGATGCTGTAGCCATTGGTAGTCGCACGCCAGAGCGGTTGTTTAGAGTCCTCGACGTGTTTGAGACATTGCGTGATCTGATTCCTGAGTTTGAAGCATTGTTTTCTGATCAGTATTGCTCGTTTCTTGTTAACGAAGCTATCACGATTTGGAAGAGGTTAGGAGAAGCTATAAGAGGGATTTTCACCGAACTTGAGAATCTGATTAGCCGTGATCCTGTAAAGGCGGTTGTTCCCGGTGGTGGTCTTCATCCCATTACTCGTTACGTGATGAATTACCTTCGTGCCGTGTGTCGGTCACATCAAACCCTAGAACTTGTTTTCAAAGACAATGCACTGTCTTTGAATGACTACCCTAAGCATGATGATAGGTTACGACCAAATTCACCATTTTCTATTCAAATTTCATGGATTATGGACTTGTTGGAACGAAATTTAGATGCGAAGTCTAAACTTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGGTACATTGTTCAGAAGACTAAAGACAGTGAACTGGGAACGCTTTTGGGTGATGATTGGATAAGAAAACACAGTACAAAAGTGCGGCAATGCCATATGAACTATCAAAGAAGCTCGTGGAACAAGTTGTTAGGTTTTTTGAAGGTGGAGACAATGACTGCAAAGCCCATGAAGGAGAAACTAAAGATGTTCAATCTTCATTTTGAAGAGATATGCCGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCGGTCGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCAAATTATTCCGGAGTTTGCTAAGAATGGTGATAAGTATATCAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAATAATTTGTTTCAGGGAAGCAGTGGATCAAATGGTGGCCGAAAGTGA 1896 0.4531 MSENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSKENLSNEGVGNDSLRCAALEQTINSLHRRISNHLSSEDFICYNSATFLAAVDELVSIIEDWSPLSDDKSVGACLIRADDILQQAMFRAEEEFRSLMELGGESFDLTRSKEKSTLYDSNEDEDDEEELDGEVDGEDDVIPVAKAVVDYNVVIDALPPATVNGLREIAKRMLAAGFGKECSHVYGVCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLGDRVFSGLSSSSAVADLSFMEVCRGSAIQLLNFADAVAIGSRTPERLFRVLDVFETLRDLIPEFEALFSDQYCSFLVNEAITIWKRLGEAIRGIFTELENLISRDPVKAVVPGGGLHPITRYVMNYLRAVCRSHQTLELVFKDNALSLNDYPKHDDRLRPNSPFSIQISWIMDLLERNLDAKSKLYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSTKVRQCHMNYQRSSWNKLLGFLKVETMTAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISVEKLLLPAYGSFIGRFQIIPEFAKNGDKYIKFGMEDIEARLNNLFQGSSGSNGGRK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04679 631 Gene3D Exocyst complex component Exo70 84 629 - -
Vivi3g04679 631 MobiDBLite consensus disorder prediction 160 174 - -
Vivi3g04679 631 Pfam Exo70 exocyst complex subunit 263 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi3g04679 631 SUPERFAMILY Cullin repeat-like 86 620 IPR016159 -
Vivi3g04679 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 622 IPR004140 GO:0000145|GO:0006887
Vivi3g04679 631 MobiDBLite consensus disorder prediction 152 174 - -
Vivi3g04679 631 FunFam Exocyst subunit Exo70 family protein 79 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04679 Vivi-Chr3 86459047 86461294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04679 1 631 EXO70 exocyst subunit family AT5G58430 66.250 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04679 K07195 - qsa:O6P43_020415 868.996