Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04672 ATGTCTGAAAACGGGGAAGAGAAATTACTCGCTGTGGCGCGCCACATAGCAAAAACGCTAGGCCACAACAACAATAATATGGCCGATGATATTCTTCAAATATTCTCTAACTTCGATGGTAGATTCTCCAAAGAGAATCTATCAAACGAAGGTGCAGGGAATGATTCCCTACGCTGCGCTGCACTTGAACAAACTATTAACTCTCTCCACCGTCGGATTTCGAATCATCTCTCGTCGGAGGATTTTATTTGTTATAACTCCGCCGCCTTTCTCGCCGCCGTTGACGAGCTTGTTTCTATTATCGAAGACTGGAGTCCTCTCTCCGATGATAAATCCGTCGGCGCGTGTCTTATCCGCGCCGATGATATACTCCAGCAAGCCATGTTCCGTGCGGAGGAAGAGTTTCGATCACTCATGGAACTCGGAGGCGAGTCATTTGACCTGACTCGGAGTAAGGAGAAGTCAACTCTGTATGACTCGAACGAGGAGGAGGATGATGAAGAAGAACTTGACGGTGAAGTTGACGGCGAAGATGACGTGATTCCGGTGGCGAAGGCGGTTGTTGATTACAACGTGGTGATTGACGCGCTTCCGCCGGCGACGGTGAACGGACTCAGAGAAATCGCGAAACGGATGTTGGCGGCGGGGTTTGGGAAGGAGTGCTCGCATGTGTACGGAGTTTGCAGGAGGGAGTTTTTGGAGGAGAGTTTGTCTAGGTTAGGGTTACAGAAATTGAGTATATCCGAGGTTCATAAGATGCCATGGCAGGAACTTGAAGACGAGATTGAACGATGGATTAAAGCTTCTAACGTTGCTCTGAAAATCCTCTTTCCAAGCGAGCGGCGTCTCGGCGATCGTGTTTTCTCTGGTTTAAGCTCTTCATCTGCAGTTGCTGATCTGTCCTTCATGGAGGTCTGTCGTGGATCAGCAATTCAGTTGCTGAATTTCGCAGATGCTGTAGCCATTGGTAGTCGCACGCCGGAGCGGTTGTTTAGAGTCCTCGACGTGTTTGAGACATTGCGTGATCTGATTTCTGAGTTTGAAGCATTGTTTTCTGATCAGTATTGCTCGTTTCTTGTTAACGAAGCTATCACAATTTGGAAGAGGTTAGGAGAAGCAATAAGAGGGATTTTCACTGAACTTGAGAATCTGATTAGCCGTGATCCTGTGAAGGCGGTTGTTCCCGGTGGTGGTCTTCATCCCATCACTCGTTACGTGATGAACTACCTTCGTGCTGTGTGTCGATCGCATCAAACCCTAGAACTTGTTTTCAAAGACAATGCACTGTCTTTGAATGACTACCCTAAGCATGATGATAGGTTACAACCAAATTCACCATTTTCTGTTCAAATTTCATGGATTATGGACTTGTTAGAACGAAATTTAGATGCGAAGTCTAAACTTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGGTACATTGTTCAGAAGACTAAAGACAGTGAATTGGGAACGCTTTTGGGTGATGATTGGATAAGAAAACACAGTACAAAAGTGCGGCAATGCCATATGAACTATCAAAGAAGCTCGTGGAACAAGCTGTTAGGATTTCTGAAGGTGGAGACAATGGCTGCAAAGCCCATGAAGGAGAAACTAAAGATGTTCAATCTTCATTTTGAAGAGATATGCCGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGAATCTCAGTCGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCAAATTATTCCGGAGTTTGCTAAGAATGGTGATAAGTATATCAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAATAATTTGTTTCAGGGAAGCAGTGGATCAAATGGTGGCCGAAAGTGA 1896 0.4504 MSENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSKENLSNEGAGNDSLRCAALEQTINSLHRRISNHLSSEDFICYNSAAFLAAVDELVSIIEDWSPLSDDKSVGACLIRADDILQQAMFRAEEEFRSLMELGGESFDLTRSKEKSTLYDSNEEEDDEEELDGEVDGEDDVIPVAKAVVDYNVVIDALPPATVNGLREIAKRMLAAGFGKECSHVYGVCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLGDRVFSGLSSSSAVADLSFMEVCRGSAIQLLNFADAVAIGSRTPERLFRVLDVFETLRDLISEFEALFSDQYCSFLVNEAITIWKRLGEAIRGIFTELENLISRDPVKAVVPGGGLHPITRYVMNYLRAVCRSHQTLELVFKDNALSLNDYPKHDDRLQPNSPFSVQISWIMDLLERNLDAKSKLYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSTKVRQCHMNYQRSSWNKLLGFLKVETMAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISVEKLLLPAYGSFIGRFQIIPEFAKNGDKYIKFGMEDIEARLNNLFQGSSGSNGGRK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04672 631 Gene3D Exocyst complex component Exo70 76 629 - -
Vivi3g04672 631 Pfam Exo70 exocyst complex subunit 263 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi3g04672 631 FunFam Exocyst subunit Exo70 family protein 79 627 - -
Vivi3g04672 631 MobiDBLite consensus disorder prediction 160 175 - -
Vivi3g04672 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 622 IPR004140 GO:0000145|GO:0006887
Vivi3g04672 631 SUPERFAMILY Cullin repeat-like 85 620 IPR016159 -
Vivi3g04672 631 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04672 Vivi-Chr3 86104005 86106250 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04672 1 631 EXO70 exocyst subunit family AT5G58430 66.719 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04672 K07195 - qsa:O6P43_020415 871.307