Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04662 ATGGAAAATCATGAAGCATCCTTAAAGCTTGAAATGAAAGATGTTGTGCTTATAAAACCATCAAAACCAACTCCTCCTAGTATTCTTTCTTTGTCTACACTTGACAATAAAGAAAACAATAATAACATTTGCCAAACAGTTCATCTATACTTACCATCAGAAAATCATGAGTCTGATTCTAGTTTCAACCCTTCTCATGTATTGAAAGAAGCACTCTCCAAAGTTTTGTGTTATTATTATCCTCTTGCAGGTAGACTAGTGAAACATGCTTATGATGGAAAACTTAGAGTTGATTGCAATGCTAGTAGCACAGAGTTTGGTGTTCCTTTCTTGGAAGCAATTGCTAACTGCAGTCTTTCTTCTATTCATTACTTAAACAATAATGACATAGAAATTGCAAAACATTTGGTCCTAGATCTTCCTTCTCCTCAAGATAAATCTTACCCTTTGGTGTTCATGGTTACACAATTTATTTGTGGTGGTTTCACAATTGGTATGGGAATATCACATGCTATTTGTGATGGAGCTGGTGCTTCTCAGATCTTCAAAGCAATTGTTGAACTTGCAAGTGGAAGAAGTGAGCCTTTAGAAAAACCTGTATGGGAAAGAGAGAAACTAGTTGGATCTATAACTAAACAACCATTTTCGCAATGCTCGATCGACATTAAATCGATGGCTTCTACACCTTTTCTGAATCAAACTAACAATACAATTATTAAGCTATATTGTTTTAAAGTGACAGGTGAAATGATAAAAAGGCTTAAGTTGAGTTTGATGAAAGAAAGTGAAAAACTAGGGTTCACAACTTTTGAAGCCCTCGCTGGTTATGTATGGAGGTCAAGAGTTAGAGCCTTAAAACTTAGCAACAATGGAGAAACAATGTTGGATATGTTAGTTGGAATTAGACGCAGCTTGAAGGATTGTTCTTTGCCGAAAGGTTATTATGGAAATTCGATAGTGAATGGAAAAGTTGTCTTGAAAGTGAATGAGATCAACGAAAAACCACTCTATGAAGTTGTTAAGTTGATCAAAGAGACTAAGAATGTTGCTTTCACCGCTGATTATGTGACAAAATCGATAAACTTTTACGAGACGAATAGAGAGGAGGATATGAGCTTGGAATTGGAAGCTAGTGGTGCAGTAACTGTTTTGACTGAGTGGAAGCATTTAGGGTTTGACAACAATATAGATTTTGGAGGGTATAGAGCAATGAATTTTGTACCAGTACCATGCAAGATGCTTGCAACCATAGATACATGCATATTTTCGGCTCCTAATATGTTTGATGAACATGATACATCAATGAAAGGAGGGGTGAGGATTTTCACATCACTCCCAGTTGATGCCATGGCCAAGTTCAGGGATGAAATAGAAGCTTTAAGGTTTCTTAATTAA 1395 0.3606 MENHEASLKLEMKDVVLIKPSKPTPPSILSLSTLDNKENNNNICQTVHLYLPSENHESDSSFNPSHVLKEALSKVLCYYYPLAGRLVKHAYDGKLRVDCNASSTEFGVPFLEAIANCSLSSIHYLNNNDIEIAKHLVLDLPSPQDKSYPLVFMVTQFICGGFTIGMGISHAICDGAGASQIFKAIVELASGRSEPLEKPVWEREKLVGSITKQPFSQCSIDIKSMASTPFLNQTNNTIIKLYCFKVTGEMIKRLKLSLMKESEKLGFTTFEALAGYVWRSRVRALKLSNNGETMLDMLVGIRRSLKDCSLPKGYYGNSIVNGKVVLKVNEINEKPLYEVVKLIKETKNVAFTADYVTKSINFYETNREEDMSLELEASGAVTVLTEWKHLGFDNNIDFGGYRAMNFVPVPCKMLATIDTCIFSAPNMFDEHDTSMKGGVRIFTSLPVDAMAKFRDEIEALRFLN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04662 464 Pfam Transferase family 9 459 - -
Vivi3g04662 464 Gene3D - 5 217 IPR023213 -
Vivi3g04662 464 PANTHER ACYL TRANSFERASE 4 9 458 - -
Vivi3g04662 464 Gene3D - 232 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04662 Vivi-Chr3 85782977 85784462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04662 8 408 Monolignol Biosynthesis Gene Families AT5G48930 27.033 3.64e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04662 K20240 - gmx:100801843 428.713