Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04658 ATGTCCCGTGTCAAAGCCATAGTAACGTATAAGAGGGAACCAATAACTCTCTCTCTATGTCATCCATCCACACATGATCACAATTCTCTCCCAAATGGGTTTCTGTTTTCCCCTCTCCTCCTTCCCTCAAAGTCTCTCAACCACTCTCTTCCTGCTCCATCCATGGACTCAGACAAAGACAATCTTATGCATGATGGACCAGAATCACAGTTTGGAGGATCCTTCATATGCCACACTGCCAATCGAATCAACTCTAGAGGATATTGGTTAGGCGAAAATCCCCTTGCTTTTTCTGTCCCTCTTTTCTTGATCCAGGTTTTCATCATATTCATCTTCACAAGATTCAGTCATGTTCTTCTCAAGCCCTTTGGTCAACCTTCTTTTGTTTCTCAGATTCTTGGTGGTGTAACTCTAGGCCCTTCAATTCTTGGTCATTACTCAGCTTTTACAAACAATTTTTTCCCGGTAAGAGGACGAAACGTGCTGGACACGTTAGCGTTTTTCGGGTTCATGATATTCATTTTCCTGCTTGGGGTAAAGATAGATCCAACCATCATTTTTCGGTCGGGTAAAAGGACGTTCGCTATCGGGATTTTATGCTTCTTTGTTCCGTATACTCTCAGCGGGTTAGTCGCTGTGTTTATCAACCATTTTGCGTCATTGGATCATGCTATTTCGAAAGGCCTTCCGACTGTGGTGGAAATTCAATGTATCACTGCCTTTCCGGTCATTTCGTGTTTTCTGACTGAACTTCATATCCTCAATTCGGAGATTGGACGGTTGGCTTCGTCGTCTTCGCTAGTATGCGATGTTTGTTTCGGTTTAGTTATGATGTTGAAGTTTGCAGCGAAACTAACTTCCACTAAATCGATAGGCGTGACCATTGGATCGCTCTTTTCGTCCGCGCTTCTTGTTTTTTTCATCATTTTTGTTGTTCATCCAGCTGCATTGTATGCTATTAATCATACACCAGAAGGGAAACCTGTTCAAGAAGTTTTTATAATTGGAACTTTGATAATACTAATATTCTGTGGATTCATCGGCGAAGTTATCGGCTTAGACGCAATTGTTGTATCTTTTATGGTAGGGTTGGCTATACCAGATGGTCCTCCATTAGGTGCAGCATTAGTAGATAAGCTCGAGTGTTTTGTTTCGGTCGTGCTTTTACCGTTGCTTTTCGCTGTCGTTGGAATGAGGACAGATGTTTTTGCTATACAGAAGATGAAGACTTTGGGGATAGTTGAGTTGATTATTTGCGTCGCATTCATCGGTAAAATATTAGGGGCTTTATTGCCTCTACTTTTCTATAGGATGCCATTTAGAGATGCAATATCTCTTAGTCTTATAATGAATTGCAAAGGCACTGTTGAATTGGCATTGTTGATGAACATGAAGTTAAAAAATGTTTTGGATGATGAACTGTTTTCAATTCTGGTTCTTACTTTAGTGCTTGTAACCGGCATTGTATCGCCGGTGGTGAAAGCTCTATATGATCCTTCTAGAAGATTTCTTGCTTATAAAAGGAGAACAATCTTGCATCACCCAAGCGAAGAAGAATTTAGAATACTAGCTTGCATTCATAAAGAAGATAATGTGTTGGCTGTTTTGAACCTACTTGCTGCTTCGAATCCATCTGAAAAAGCCCGCATCGATTTAGTTGTACTACAGCTTGTTAAGCTTGTTGGAAGAGCTGCATCCGTGCTTGTTTCGCACAAGCCTCGCGATAAGCCTGGCGAAAAAATCTTCAATCCGTTCACCAAATTCGAAGATGTGTATAGAGGAAAGGTAACACTACATTGTTATAAAGGTATCTCACCATATGCAACAATGCACAATGATGTGTGCTACTTAGCACTTGAAAAAAGAATAACTTTCATAATTATACCTTTTCATAAACAATGGATAATCGGAGGAATGGCCGAGTCATCTTTCGCATTCAAGCAACTCAACAAGAATGTTCTCGAGAAAGCTCCTTGCTCGGTTGGTGTCCTAATTGATCGCGGCAACCAGAAGAAATTCTGGTGCGGTTACATGAACGAATCAACATATCTAGTTGCCGTGCTTTTCTTTGGAGGCGCAGACGATAGAGAAGCCCTCGCATACGCGAAACGAATGTTGGATCAACCTAATGTAAATATTACTCTCTTTCATTTTTCGTCGGCCGAAAACGACGTTGTTGGCGGTACAGATAGAAGCAAAAAGCTTGATACTCAAATATTGAGCGAGTTTAGGCTAAGTGGTTTTAGGAATGATAGAGTTACGTATAAAGAAGAAGATGTCATGAACGGAAGAGACGTGCTTTCGGTTATCGAATACATGGAGAGTTATTACGACCTCGTTATGGTAGGAAGGAAACATGAGGATTCACAGTTGATGTCTGAACTTAAGAAATGGAAGCATGGTGAGTTGGGAACTGTAGGAGAGATTCTTGCTTCTTTGAACATTGGTGCTAAAACATCAGTTTTGGTTGTGCAACAACAAACTAAATTTTGGGGGTCACGTGATCCAGAGGAGTCTACACATTTGAGAAGAGTAAATATATAG 2544 0.4076 MSRVKAIVTYKREPITLSLCHPSTHDHNSLPNGFLFSPLLLPSKSLNHSLPAPSMDSDKDNLMHDGPESQFGGSFICHTANRINSRGYWLGENPLAFSVPLFLIQVFIIFIFTRFSHVLLKPFGQPSFVSQILGGVTLGPSILGHYSAFTNNFFPVRGRNVLDTLAFFGFMIFIFLLGVKIDPTIIFRSGKRTFAIGILCFFVPYTLSGLVAVFINHFASLDHAISKGLPTVVEIQCITAFPVISCFLTELHILNSEIGRLASSSSLVCDVCFGLVMMLKFAAKLTSTKSIGVTIGSLFSSALLVFFIIFVVHPAALYAINHTPEGKPVQEVFIIGTLIILIFCGFIGEVIGLDAIVVSFMVGLAIPDGPPLGAALVDKLECFVSVVLLPLLFAVVGMRTDVFAIQKMKTLGIVELIICVAFIGKILGALLPLLFYRMPFRDAISLSLIMNCKGTVELALLMNMKLKNVLDDELFSILVLTLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHPSEEEFRILACIHKEDNVLAVLNLLAASNPSEKARIDLVVLQLVKLVGRAASVLVSHKPRDKPGEKIFNPFTKFEDVYRGKVTLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVLFFGGADDREALAYAKRMLDQPNVNITLFHFSSAENDVVGGTDRSKKLDTQILSEFRLSGFRNDRVTYKEEDVMNGRDVLSVIEYMESYYDLVMVGRKHEDSQLMSELKKWKHGELGTVGEILASLNIGAKTSVLVVQQQTKFWGSRDPEESTHLRRVNI 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04658 847 Pfam Sodium/hydrogen exchanger family 108 493 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04658 847 Gene3D - 101 503 IPR038770 -
Vivi3g04658 847 PANTHER CATION/H + ANTIPORTER 76 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04658 Vivi-Chr3 85689298 85692342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04658 63 847 Antiporter Super Family AT2G13620 38.095 9.73e-176 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04658 K26731 - gmx:102665255 1141.72