Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04645 ATGATGCTGCGACTTAAGCTAGTGTTCACAATGTTGGTGTGTTGGAACATAATAACTAGCTATAACTGTGTAGTTGGAGATTCACAAACAAGTATAGTACTGAGCAGTGGTTGCAGCACATACAACACATCAAATTTGCGTAGTTTCTATGCAAACATTAATGGAACATTTTCAGATTTGAGAAATCAAATTAGCAATGGAAGCAAACACTTTGCAACGGCAAAAGAAGCAAGAGGAAATGTGATAGTATATTCTCTTTTTCAATGCAGAAATTACCTCTCCAAAAAGGATTGCGTTGCTTGCTTCAACACAGCTTCTACAAAAATTCGTAACTGCTCAGCTTCCAATGGTGCTAGACTCGTCTACGATGGCTGTTTCTTAAGGTACGAGAGTGAAAGATTCTACGATCAAACAAATCAACCTGGGGGTGGTATATTATGTGGGAACAAGGCCGCAAAGGAAGGCGCCTCTTTTGGAACAATTGGACTAAAAGTGCTAATGGATCTCCAATTAGCAACACCAAAAATTAAAGGCTTTTTTGCAGCTACTAAGACAGTGGTGAATCCTGGTAGCAATAGTTCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACAGAAAGTGCTTGTCTTGATTGCATGACAGTTGGATACAACAGCTTGCAAACTTGTCTTCCTAATACAGATGGTAGAGCATATGAAGCAGGGTGTTTTATGAGATACTCAGAGACACCCTTTTTTGCTGATAAAAAGGCTATTGATATCACAACCTATTTAAATCAAGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGTTGTCGGAGGTGTAGGTCTTGTTGCGATCATTCTTGCAATATTAGCTTGGCGACAATACAGAAAACCCAAGAGAGCTCCTAGAGGCAATATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTGAAAGCTGCAACAAAAAACTTCAGTGAAGAAAATAAATTGGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACTTTGAAAAATGGAAATGTTGTAGCAGTCAAGAAACTGGCTTTGGGAAAATCCAGCAAGATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAAACAAGAGAGAATCCTTGTTTATGAATACATGGCCAACAGCAGCCTAGACAAATTCTTATTTGGTGAAAAACAAGGCTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTAGGCACGGCAAGGGGACTGGCCTACCTACATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATACTCCTTGATGATAATATTCACCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTTTGCCCGGGGATCAATCTCATCTAAGCACAGGAGTTGCAGGAACATTGGGATACACGGCACCTGAGTATGCAATTCATGGTCAATTATCAGAAAAGGCTGATACCTACAGTTATGGTATTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACAGAAGTAAAGGAAGATGATGATGGTGATTACCTTCTTCAAAAGACATGGAAACTGCATGAGAGAGGCAGGCACTTGGAGCTCGTGGACAAGACCTTAGACCCTAATGACTTTGATAATGACTTTGATGGAGAAGAAGTGAAGAAAAGGATAGAGATTGCTTTACTATGCACTCAAGCATCAGCAGGAATGAGACCAACAATGTCCGAAGTGGTAGTCCTCCTCCGAAGCAGGAATTTAGTGGAGCACCTACAGCCAACTATGCCTGTGTTTGTAGATACGAATCTTAGGTCTCGTGAAGGACACTCTACCTCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCTTTTCTATTTTATCAGCTCGGTGA 1953 0.3999 MMLRLKLVFTMLVCWNIITSYNCVVGDSQTSIVLSSGCSTYNTSNLRSFYANINGTFSDLRNQISNGSKHFATAKEARGNVIVYSLFQCRNYLSKKDCVACFNTASTKIRNCSASNGARLVYDGCFLRYESERFYDQTNQPGGGILCGNKAAKEGASFGTIGLKVLMDLQLATPKIKGFFAATKTVVNPGSNSSIYAIAQCVETATESACLDCMTVGYNSLQTCLPNTDGRAYEAGCFMRYSETPFFADKKAIDITTYLNQGSSNKWAIIGGVVGGVGLVAIILAILAWRQYRKPKRAPRGNILGATELKGPVNYKYSDLKAATKNFSEENKLGEGGFGDVYKGTLKNGNVVAVKKLALGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKKQERILVYEYMANSSLDKFLFGEKQGSLNWKQRCDIILGTARGLAYLHEEFHISIIHRDIKTSNILLDDNIHPKIADFGLARLLPGDQSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKEDDDGDYLLQKTWKLHERGRHLELVDKTLDPNDFDNDFDGEEVKKRIEIALLCTQASAGMRPTMSEVVVLLRSRNLVEHLQPTMPVFVDTNLRSREGHSTSTGSSTSNATASFSILSAR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04645 650 Pfam Protein kinase domain 328 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04645 650 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Vivi3g04645 650 FunFam Cysteine-rich receptor-like protein kinase 2 404 610 - -
Vivi3g04645 650 Gene3D Transferase(Phosphotransferase) domain 1 404 613 - -
Vivi3g04645 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Vivi3g04645 650 SMART serkin_6 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04645 650 MobiDBLite consensus disorder prediction 625 650 - -
Vivi3g04645 650 FunFam Cysteine-rich receptor-like protein kinase 2 142 246 - -
Vivi3g04645 650 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Vivi3g04645 650 Gene3D Phosphorylase Kinase; domain 1 296 403 - -
Vivi3g04645 650 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Vivi3g04645 650 CDD STKc_IRAK 333 599 - -
Vivi3g04645 650 FunFam Cysteine-rich receptor-like protein kinase 2 292 403 - -
Vivi3g04645 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 637 - -
Vivi3g04645 650 SUPERFAMILY Protein kinase-like (PK-like) 310 602 IPR011009 -
Vivi3g04645 650 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Vivi3g04645 650 ProSiteProfiles Protein kinase domain profile. 327 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04645 650 Gene3D - 145 246 IPR038408 -
Vivi3g04645 650 Gene3D - 30 134 IPR038408 -
Vivi3g04645 650 Pfam Salt stress response/antifungal 153 243 IPR002902 -
Vivi3g04645 650 Pfam Salt stress response/antifungal 38 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04645 Vivi-Chr3 84963509 84967515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04645 17 650 Receptor kinase-like Gene Family AT1G70520 37.327 5.67e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g04645 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04645 - - gmx:100801131 869.381