Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04621 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTCGAATCGAATTGGAAATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCAGGAAAAGATTTGGAATGGTATTTTTTCAGTCCACGAGACAGGAAGTATCCAAATGGATCGAGAACAAATAGAGCTACGAAATCTGGATATTGGAAAGCAACCGGGAAAGATCGGAAGGTGAATTCACAGACTCGCGCTGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCTCCTCATGGATCTCGTACCGGTTGGGTTATGCATGAGTATCGTCTTGATGAAAGAGAATGCGACAATCCTTCTTCAGGATTGCAGGACGCATATGCGCTATGCCGAATATTCAAGAAGAGTACAGTGATTGTTCCAAAAGTTGGGGAGCAGTATGTGAATAATGTGACCATGCATGCAAATCATATGACAAGTGATCAATCATCAAGCATTGAGTTATATTCTGAAGGGAGAGATGAAGTTTTGGAGAGCTCAAATTATTTGATGCCATGGGATAATACAAACTCAACCCAAACCCTAAATGGGGCTAATACTTTTAGCAACAATGGTGGAGATATCTCGAGGGATAATAATGGGATTTGGACACAGTTTTTATCAGAAGATTTACTCAATCTTCCAACATCTTCTTCATCATTTCCCAATTATGGTTCCACTCCGAATTACCCTCCATCAAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACCATGCCACCCTTGGAGGTGCAAGACTTCCCTCAAGTTGGTATTTCTGATCACAAAACAACACACTTCGCCTCCGGTTCCATGTGTGGAACCAGAAATGACACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAGGAACTGATTAACCAATCAAACTACTCACATACATTTGGTGGCAATGAAAACTATGGTACTCATCATGAACATGATAATGATTTCACTTTTATGGTTGGCAATAATAACAATTACAATCATATGAGTGATCATATGATGAACTCCATGAGATTTGATGACAAAGCATGGGAAGATCCAAACACAAGATCTATAGAGATTGGGAATCTTGATGATGAGTTCAAGACAGAAAGGATGGTTGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAAAAGAGTTTTATGGAAGAGAATCAAAAGGTTGTTCCAATTGAAGATATTTCAAGCTTCCACACAAATAGGAAAGAGAATGAGGTGCAAGTGGAATCTGAGCATCAAAACATGAACAAAGAAATCAATGACACTGACATTGATAATTTCTCAATGGAGTTTATCAATGATAATGATAACCCTAATGAGAATTTTATAGATGATGGTACCATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGTCAAGTAGCAGACACATTCTTCCACAAGCTAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTATGGAAAACACAAAATTCATAGAAAAAGCAAAGACATTGATGATACCAAACAAACAAGGTTACTCTCTCTTAAGGAAAATTAAGGCCAATTTGATGGAGTACATGAAGAAACCATCAAAGACAATAGCAAGTGCCATTGTGTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTTGAAGAAATGAAACCAAAGTCAGTGTGTGTGAAAAAGAAGTATTGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGAAAGAAAAAGATTGGTTTGTTGGTATCAAAAATGGAAAAGGTTTTGATGTGGTGTTGAAGAAGATAGGAATTTTTCTCACCATATCATTGGCTATTTGTACTATGTGGGCTAACCATATGATATAG 2034 0.3766 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSSGLQDAYALCRIFKKSTVIVPKVGEQYVNNVTMHANHMTSDQSSSIELYSEGRDEVLESSNYLMPWDNTNSTQTLNGANTFSNNGGDISRDNNGIWTQFLSEDLLNLPTSSSSFPNYGSTPNYPPSKVDIALECARMQHRFTMPPLEVQDFPQVGISDHKTTHFASGSMCGTRNDTDILQEILSVAQASQELINQSNYSHTFGGNENYGTHHEHDNDFTFMVGNNNNYNHMSDHMMNSMRFDDKAWEDPNTRSIEIGNLDDEFKTERMVENLRWVGMSSNDLEKSFMEENQKVVPIEDISSFHTNRKENEVQVESEHQNMNKEINDTDIDNFSMEFINDNDNPNENFIDDGTIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHKLTPSQTIKVQLNPIMENTKFIEKAKTLMIPNKQGYSLLRKIKANLMEYMKKPSKTIASAIVFMFALFLVLCVYLKEQVEEMKPKSVCVKKKYCYGANSMKKIIWNEKEKDWFVGIKNGKGFDVVLKKIGIFLTISLAICTMWANHMI 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04621 677 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Vivi3g04621 677 FunFam Nac domain-containing protein 86 15 160 - -
Vivi3g04621 677 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Vivi3g04621 677 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Vivi3g04621 677 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Vivi3g04621 677 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04621 Vivi-Chr3 84103574 84107576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04621 1 603 NAC Transcription Factor Family AT1G65910 47.126 6.05e-162 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi3g04621 NAM 7.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04621 - - gsj:114381841 949.503