Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04611 ATGGTTCTCTCAAAAACAGCCTCCGAGTCCGATGTCTCCGTCCACTCTACCTTTGCTTCTCGCTATGTCAGAACTTCACTTCCCAGATTCAGGATGCCGGAGGAATCGATACCGAAGGATGCGGCATATCAGATCATAAACGATGAACTGATGCTGGATGGAAATCCAAGGTTGAATCTGGCATCGTTTGTGACAACATGGATGGAGCCAGAGTGTGATAAACTCATCATGGCTTCCATCAACAAGAACTACGTTGACATGGATGAATACCCCGTCACCACTGAATTACAGAATCGGTGTGTTAACATGATAGCTCATCTTTTCAATGCACCCCTTGAAGAAACTGAGACTGCAGTTGGTGTTGGAACTGTTGGTTCATCAGAAGCCATAATGTTAGCAGGATTAGCATTCAAAAGAAAATGGCAGAACAAAAGAAAACTTGAGGGAAAGCCTATTGACAAACCCAACATTGTCACTGGAGCCAATGTCCAGGTTTGTTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAAGTGAAACTAAGTGAAGGATACTATGTAATGGACCCTAAAAAGGCTGTGGAGTTGGTTGATGAGAACACCATTTGTGTTGCTGCTATTCTTGGTTCAACGCTGAATGGCGAGTTTGAAGATGTTAAACTCTTAAACGATCTCCTTGTTGAAAAGAATAAGGAAACTGGATGGGACACTCCTATTCATGTTGATGCAGCTAGTGGTGGATTCATTGCTCCATTTATTTATCCAGAGCTCGAGTGGGATTTTCGTTTACCGCTAGTGAAGAGCATCAACGTTAGTGGTCACAAATATGGTCTTGTTTATGCTGGAATTGGTTGGGCTATTTGGAGAAGCAAGGATGATTTGCCTGAGGAACTCATCTTTCACATCAACTATCTTGGGGCTGATCAACCTACATTTACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAATACTATCAAATGATTCGCCTTGGTTTTGAGGGGTATAAAGGTGTGATGGAAAATTGTAGAGACAACATGATAGTACTAAGAGAAGGACTCGAGAAAATGGGGCGTTTCAACATTGTGTCGAAAGACGACGGTGTTCCTCTCGTGGCCTTCACATTGAAGGACCACACACACTTCGACGAATTCCAAATCTCCGACTTGTTGAGGCGCTCTGGCTGGATTGTTCCGGCATACAGCATGCCTCCGGACGCTCAACACATAACCGTTCTACGCGTTGTCATAAGGGAGGATTTCTCGAGGACTTTAGCAGAGCGCCTTGTGGCGGATATCGAGAAAGTGTTGCACGAGCTCGATGCACTTGCAGCAAGGATAAGGATGATAAGTAGCAGTAGCAATGTTACGGTTCTTGAAGAAGTTGTGAAGAGTAATGGTGAAGTTGTGAAAGCGAAAAAGAGTGCTTTGGAGACTCAAAGAGAGATAACTGCGGTTTGGAAGAAGTTTGTGCTGGAGAGGACGAAGTTGAATGATAAGATGAATGGTGTTTGCTAG 1530 0.4392 MVLSKTASESDVSVHSTFASRYVRTSLPRFRMPEESIPKDAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKLEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPKKAVELVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKDDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQMIRLGFEGYKGVMENCRDNMIVLREGLEKMGRFNIVSKDDGVPLVAFTLKDHTHFDEFQISDLLRRSGWIVPAYSMPPDAQHITVLRVVIREDFSRTLAERLVADIEKVLHELDALAARIRMISSSSNVTVLEEVVKSNGEVVKAKKSALETQREITAVWKKFVLERTKLNDKMNGVC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04611 509 FunFam Glutamate decarboxylase 1 65 - -
Vivi3g04611 509 Gene3D - 1 65 - -
Vivi3g04611 509 FunFam Glutamate decarboxylase 66 360 - -
Vivi3g04611 509 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi3g04611 509 Gene3D - 66 360 IPR015421 GO:0003824
Vivi3g04611 509 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Vivi3g04611 509 Gene3D - 361 447 - -
Vivi3g04611 509 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi3g04611 509 FunFam Glutamate decarboxylase 361 448 - -
Vivi3g04611 509 Coils Coil 430 450 - -
Vivi3g04611 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04611 Vivi-Chr3 83882122 83887987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04611 1 509 Calmodulin-binding Proteins AT5G17330 83.366 0.0 885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04611 3 83882122 83887987 Vivi3g04611 3 83882122 83887987 ECH