Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04598 ATGGATGCTCTGCTTTCTACCATCACCTCCTCCACTAAACCCGATCTTTACATCAACGGTCCCAGAGGAACCCGAATTCCAGCTGATGCAGCCATTTTGGCTTCAGCGTCCCCAGTTCTAGATAACATGATAAAATCCAACAGAATCGTCGAAATCCGCGGCGTACCATACGACGCCGTCACAGCCTTTGTACGTTTCCTCTACACCTCCAGGTGCAGCGAGGAGGATATGGAAAATTACGGAATACACCTTCTTTCATTATCGCACGCGTATTCAGTGCCAAAGCTGAAGCAGAGTTGCGTTACTGGTTTGTCCAAACTTGCGACTATAGAAAATGTAGTGGACGTGTTGCATTTAGCAAGGCTCTGCGATGCACCGGATCTTTACCTCAACTGTGCGATGTTAATTAGAAAAAAATTCAGATCAGTGAAGAAAACAGAGGGATGGAAATTCTTGCACACAAATGATCCTCGGCTCGAAAAGGACATTGTCCAATTCATCAACGAGGACAAATCGAGGAAGTCGAGAATGAAGAGACAGAGGGAGGAACAGGAGGTGATTATGCAACTGAGTGAAGCAATGGAATGTTTGGAACATATATGTACGGAAGGATGTACCAGCGTGGCGCCGTACGATGTGGATGTTAAAGAACAGAGGAAGAGGATGCCTTGTTCGAAATTCTCCACGTGTCAAGGATTGCAGGTGCTGATTCGGCATTTTGCCACGTGTGAGAAGAGGGTCAAGGGAGGGTGTATGAGGTGTAAGCGATTGTGGCAACTCTTTAGGCTTCATTCCTGTATTTGCATTCATCAAGATTCATGCAAGGTCCCTTTATGCAGGCAATTTCATTTGAAAATGGAGAAAGAGAACAAGGAAGATGATGCGAGCTGGAAATTACTAGTCAGGAAAGTGGGCTCAGCTAAAGCTATGTCTTCCTTACAGCAGCTACTAAAGAGATGA 960 0.4552 MDALLSTITSSTKPDLYINGPRGTRIPADAAILASASPVLDNMIKSNRIVEIRGVPYDAVTAFVRFLYTSRCSEEDMENYGIHLLSLSHAYSVPKLKQSCVTGLSKLATIENVVDVLHLARLCDAPDLYLNCAMLIRKKFRSVKKTEGWKFLHTNDPRLEKDIVQFINEDKSRKSRMKRQREEQEVIMQLSEAMECLEHICTEGCTSVAPYDVDVKEQRKRMPCSKFSTCQGLQVLIRHFATCEKRVKGGCMRCKRLWQLFRLHSCICIHQDSCKVPLCRQFHLKMEKENKEDDASWKLLVRKVGSAKAMSSLQQLLKR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04598 319 SUPERFAMILY POZ domain 15 135 IPR011333 -
Vivi3g04598 319 SMART TAZ_2 184 280 IPR000197 -
Vivi3g04598 319 Pfam BTB/POZ domain 18 104 IPR000210 GO:0005515
Vivi3g04598 319 SMART BTB_4 12 108 IPR000210 GO:0005515
Vivi3g04598 319 Pfam TAZ zinc finger 191 279 IPR000197 -
Vivi3g04598 319 SUPERFAMILY TAZ domain 182 283 IPR035898 -
Vivi3g04598 319 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 10 315 IPR044513 -
Vivi3g04598 319 Gene3D - 109 180 - -
Vivi3g04598 319 Gene3D TAZ domain 181 309 IPR035898 -
Vivi3g04598 319 ProSiteProfiles BTB domain profile. 14 76 IPR000210 GO:0005515
Vivi3g04598 319 FunFam BTB/POZ and TAZ domain-containing protein 2 180 308 - -
Vivi3g04598 319 CDD BACK 109 152 - -
Vivi3g04598 319 Gene3D Potassium Channel Kv1.1; Chain A 1 106 IPR011333 -
Vivi3g04598 319 FunFam BTB/POZ and TAZ domain-containing protein 2 109 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04598 Vivi-Chr3 83381861 83384372 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi3g04598 zf-TAZ 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04598 - - gmx:100813611 429.869