Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04597 ATGGATGCTCTGCTTTCTCCCATCAAACCCGATCTTTACATCAACGGTCCCAGAGGAACACGAATTCCAGCTGACGCAGCCATTCTGGCTTCAGCATCCCCAATTCTAGAGAACATGGTAAAATCCAACAAAATAATCCAAATCCGCGGCGTCCCATACGACGCCGTCACAGCCTTCGTACGTTTCCTCTACACCTCCAGGTGCAGTGATGAGGATATGGAAAATTACGGAATACACCTTCTTGCATTATCGCACGCGTATTCAGTGCCAAAGCTAAAGCAGAGTTGCGTTACTAGTTTGTCTAAACTAGCGACTATAGAGAATCTGGTGGACGTGTTGCATCTAGCAAGACTCTGCGATGCACCGGATCTTTACCTCAACTGTGCAATGTTAATCAGAAAGAATTTCAGAGCAGTGAAGAAAACAGAGGGATGGAAATTCTTACACACAAATGATCCTTGGCTCGAAAAGGACATTGTCCAATTCATCAACGAGGACAAATCGAAGAAGAAGAGAATGATGAAACATAGGGAGGAACAGGAGGTGATTATGCAACTGAGCGAAGCAATGGAATGTTTGGAACATATATGTACGGAAGGTTGTACCAGCGTGGCGCCATACGATGTGGATGTTAAAGAACAGAGGAAGAGGATGCCTTGTTCGAAATTCTCCACGTGTCAAGGTTTGCAGGGGCTGATTCGACATTTTGCCACGTGTGAGAAGAGGGTCAAGGGAGGGTGTATGAGGTGTAAGCGATTGTGGCAACTTTTTAGGCTTCATTCTTGTATTTGCATTCATCAAGATTCATGCAAGGTCCCTTTATGCAGGCAATTTCAATTGAAAATGGAGAAAGAGAACAAGGAAGATGATGCGAGCTGGAAATTATTAGTCAGGAAAGTGGGCTCAGCTAAAGCTATGTCTTCCTTACTGCTGCTAAAGAGATGA 945 0.4455 MDALLSPIKPDLYINGPRGTRIPADAAILASASPILENMVKSNKIIQIRGVPYDAVTAFVRFLYTSRCSDEDMENYGIHLLALSHAYSVPKLKQSCVTSLSKLATIENLVDVLHLARLCDAPDLYLNCAMLIRKNFRAVKKTEGWKFLHTNDPWLEKDIVQFINEDKSKKKRMMKHREEQEVIMQLSEAMECLEHICTEGCTSVAPYDVDVKEQRKRMPCSKFSTCQGLQGLIRHFATCEKRVKGGCMRCKRLWQLFRLHSCICIHQDSCKVPLCRQFQLKMEKENKEDDASWKLLVRKVGSAKAMSSLLLLKR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04597 314 FunFam BTB/POZ and TAZ domain-containing protein 2 105 175 - -
Vivi3g04597 314 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 311 IPR044513 -
Vivi3g04597 314 Pfam BTB/POZ domain 17 101 IPR000210 GO:0005515
Vivi3g04597 314 Pfam TAZ zinc finger 187 275 IPR000197 -
Vivi3g04597 314 Gene3D - 103 176 - -
Vivi3g04597 314 CDD BACK 105 148 - -
Vivi3g04597 314 ProSiteProfiles BTB domain profile. 10 72 IPR000210 GO:0005515
Vivi3g04597 314 Gene3D TAZ domain 177 304 IPR035898 -
Vivi3g04597 314 SUPERFAMILY TAZ domain 178 279 IPR035898 -
Vivi3g04597 314 Gene3D Potassium Channel Kv1.1; Chain A 2 101 IPR011333 -
Vivi3g04597 314 SMART BTB_4 10 104 IPR000210 GO:0005515
Vivi3g04597 314 FunFam BTB/POZ and TAZ domain-containing protein 2 176 304 - -
Vivi3g04597 314 SMART TAZ_2 180 276 IPR000197 -
Vivi3g04597 314 SUPERFAMILY POZ domain 9 128 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04597 Vivi-Chr3 83364404 83368442 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi3g04597 zf-TAZ 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04597 - - gmx:100813611 426.402