Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04569 ATGGAGTTTCATGGATTGGTTTTGCTATTCTTCTATGTTTGGTATGTGATTTTTTTGAGAAGTTGCAATGGTCAGTTACAATCCTCTCAGACTCAAGTTCTTCTACAATTACAAAAGCACTTAGAATTTCCAACACAATTAGAACTATGGAAAGATCATAGGGAAGAAATTTGCTTTATTTCTTCCACACAAGTCAAAGTCACATGCAAGGACAATTTTGTGACAGAGCTAACTATCTTTGGTGATAAGCCAAATAATGGTAGAGATTTTGATGGATTTGCTATTCCAAATCAAACACTGACACAAACCTTCTCATTGGACTCATTTGTTGCCACTCTTGCAAGGCTAACTAGCTTGAAAGTTCTTCATCTTGTTTCTTTAGGAATTTGGGGACCACTTCCTGATAGAATTCATAGACTAGTTTCACTTGAGTATTTGGATTTGAGTTGGAATTTTCTTTACGGATCGATCCCTCCGAAAATCTCTACTATGGTTAACCTTCAAACTCTTATACTGAGTGATAACTTCTTCAATGGCACTATCCCTAACTCGTTCAATTCATCGAATAATCTCGCTGTTCTTAGTTTAAAGCATAATAAGTTGAAGGGTCCATTTCCATTTTCGATACTTAGTATCAAAACCTTGACTAGCATTGACATGTCGAGGAATCGGATATCAGGAAGCTTGCGAGATTTTACCGATTTGAGTAACTTGGAAGAACTGGATTTAAGAGAAAATGAATTGGATTCTTCGCTACCTGAAATGCCGAAAGAGTTGATAACGCTCTTCCTCAACCGGAACTCCTTTTCAGGCCAAATTCCAAAACAATATGGTGAACTAAATAGTCTTCAGCAGCTTGATATTTCCTTCAATGCATTATCAGGAGCTACTCCTTCTGAACTTTTCTCTTTGCCTAAAATTAGTTACTTGAATTTGGGATCCAACAAGTTGAGTGGAACACTTGAAAATCAGATGAAATGTGGCCGAAATCTTAGTTTTGTCGATATATCAAACAATAGGTTAGTTGGAGATTTGCCTTCTTCTCTAAGAAATGAGTCGAAAAATAGAGTTGTTAAGAGCGATGGAAACTGTTTATCTGGGAGTTTGCAGCATCAGCATGATGTATCTAATTGCGCAGAAGCTAATGGAAAGACGGAGTCGTACCGTTTTGGAGTTTTCGTTGGCGTCATTGTTGGAATTCTTGTTATCATTATAGTTTTGGGTTTATGCATTGTTGTTACTTGTAAATGGTTGTACTCTAAGGGGATTTCGGAGCAACACCTACTGAATAAATCAGTTCAAGATAACTATTCGGCCGGGTTCTCATCGGAGCTTATTGCAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGAAGAGAAGATCTTCCTTTATGTCGATCATATTCGTTGGAAGAGCTTATGAATGCGACGAATAACTTTGACAATTCTACTTTCCTTGGCGAAAATATATACGGGAAGCTGTACAAAGGGAAACTGGAGAGTGGAATACCTGTTGTAATAAGGTGTATACCTTTGTCGAAAAAGTACTCGATTCGGAATTTTAAACTGAGGCTGGATTTGCTTGCAAAGCTTCGCCACGCGCATTTGGTATCGCTTTTGGGACACTGCATTGATGGTATTTTAGGCGAGCGTAACGACTCAAAGGTCTTTCTCATTTATGAATTCGTGTCAAATGGGAATTTTCAGACTTATCTCTCAGGAGATAGTTCTGGGAAGATTTTGAATTGGTCAGAGAGATTATCAGTTCTTATCAGTGTTGCTAAGGCTGTTCACTTCTTACACACTGGAATGATACCTGGTTTCTTCAAAAATAGACTTAAAACCAATAATATTTTGCTTAATGAAAATTGCATGGCAAAGTTGAGTGACTATGGTTTGTCTATTATCTCAGAAGAAACTGATGCAAATGAGGTGAAAGGAGAAAGCCCAAATTCATGGCAAATGAAAAAGTTAGAAGATGACATTTATAGCTTTGGATTCATATTACTAGAGGCACTTGTTGGATCTTCAATGTCAGCTAAAAAAGAAGCAACTCTTCTAAATGCAATGGCTTCCTTCAATAATCAAGATGACTGGAAACAAATAGTGGATCCAGTTGTGCAAGCTACTTGCTGCAAAGAATCTCTATCTACCGTGATTTCTATAACTAACAAATGTATTTCAACCGAGCCGTGGAGTCGACCGTCGATCGAGGATGTTCTTTGGAACTTGCAGTATGCTACTCAAGTCCAAACAACAGCTGATGGTGATCACAGAATTTGA 2286 0.3775 MEFHGLVLLFFYVWYVIFLRSCNGQLQSSQTQVLLQLQKHLEFPTQLELWKDHREEICFISSTQVKVTCKDNFVTELTIFGDKPNNGRDFDGFAIPNQTLTQTFSLDSFVATLARLTSLKVLHLVSLGIWGPLPDRIHRLVSLEYLDLSWNFLYGSIPPKISTMVNLQTLILSDNFFNGTIPNSFNSSNNLAVLSLKHNKLKGPFPFSILSIKTLTSIDMSRNRISGSLRDFTDLSNLEELDLRENELDSSLPEMPKELITLFLNRNSFSGQIPKQYGELNSLQQLDISFNALSGATPSELFSLPKISYLNLGSNKLSGTLENQMKCGRNLSFVDISNNRLVGDLPSSLRNESKNRVVKSDGNCLSGSLQHQHDVSNCAEANGKTESYRFGVFVGVIVGILVIIIVLGLCIVVTCKWLYSKGISEQHLLNKSVQDNYSAGFSSELIANARYVSEAAKLGREDLPLCRSYSLEELMNATNNFDNSTFLGENIYGKLYKGKLESGIPVVIRCIPLSKKYSIRNFKLRLDLLAKLRHAHLVSLLGHCIDGILGERNDSKVFLIYEFVSNGNFQTYLSGDSSGKILNWSERLSVLISVAKAVHFLHTGMIPGFFKNRLKTNNILLNENCMAKLSDYGLSIISEETDANEVKGESPNSWQMKKLEDDIYSFGFILLEALVGSSMSAKKEATLLNAMASFNNQDDWKQIVDPVVQATCCKESLSTVISITNKCISTEPWSRPSIEDVLWNLQYATQVQTTADGDHRI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04569 761 Pfam Protein tyrosine and serine/threonine kinase 486 742 IPR001245 GO:0004672|GO:0006468
Vivi3g04569 761 SUPERFAMILY Protein kinase-like (PK-like) 464 746 IPR011009 -
Vivi3g04569 761 Gene3D Ribonuclease Inhibitor 259 389 IPR032675 -
Vivi3g04569 761 Pfam Leucine Rich Repeat 142 158 IPR001611 GO:0005515
Vivi3g04569 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 564 761 - -
Vivi3g04569 761 Gene3D Transferase(Phosphotransferase) domain 1 564 759 - -
Vivi3g04569 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 257 - -
Vivi3g04569 761 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Vivi3g04569 761 SMART LRR_typ_2 140 164 IPR003591 -
Vivi3g04569 761 SMART LRR_typ_2 280 304 IPR003591 -
Vivi3g04569 761 SMART LRR_typ_2 235 258 IPR003591 -
Vivi3g04569 761 ProSiteProfiles Protein kinase domain profile. 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04569 761 PANTHER UNNAMED PRODUCT 108 677 - -
Vivi3g04569 761 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Vivi3g04569 761 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
Vivi3g04569 761 Gene3D Phosphorylase Kinase; domain 1 446 563 - -
Vivi3g04569 761 SUPERFAMILY L domain-like 113 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04569 Vivi-Chr3 82806444 82810575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04569 7 693 Miscellaneous Gene Families AT5G14210 50.714 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vivi3g04569 PK_Tyr_Ser-Thr 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04569 - - gmx:100802978 1093.95