Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04483 ATGGATTCTCCAACTCATAAAGAAACAGAAAGAAACCAGATAACGCCTTTAGACGATGAAGCACCGAATGCTTACAAAGTTGCAATTCCTCCGAAACAGAATTTATTCAAGGAATTCAAATATACTGTTAAAGAAACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAAGATCAAACCAAGTCAAGAAAGTTTATCCTTTGTATCGAGGCCATATTCCCAATATTTAGTTGGGGGAGAGGCTATAATCTTAAGAAGTTTAGGGGAGATATAATTGCTGGTCTCACTATTGCAAGTCTTTGCATACCTCAGGATATTGGATACTCGAAGCTTGCGCATTTGGCTCCGCAGTATGGACTGTACTCGAGCTTTGTTCCGCCGCTGATTTATGCGTTCATGGGGAGTTCTCGCGATATAGCTATAGGACCGGTGGCAGTGGTTTCTCTCTTGATGGGGACTTTGCTTAGTAATGAGATTGATCCTGTTACTCATAAAGAAGAATATCAAAGACTTGCTTTTACAGCCACGTTTTTCGCTGGGATTACTCAAGCAACTCTTGGGATTTTCAGGTTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGAGGTGCTGCCATTACAATTGGCCTACAACAGCTAAAGGGTTTTCTTGGCATTAAAACCAAAATGTTCACAACAAAAACCGATATTGTCTCCGTGCTGCATTCAGTGTTCGCATCAGCCAAACATGGATGGAACTGGCATACTATATTAATCGGAGCTAGCTTTTTGTGTTTTCTTCTGCTCGCCAAGTTTATCGGAAAGAAGAACAATAAATTCTTCTGGGTGCCAGCAATTGCTCCGTTGATTTCCGTTGTTCTGTCCACTTTTTTCGTATTCTTAACACGCGCAGATAAGCAAGGAGTAGAAATTGTAAATCATATAGAGAAAGGGATCAATCCTTCATCTGTTCATGATATTTATTTTAGCGGCGAATACCTTGGGAAAGGATTTAAAATCGGTGTCACGGCAGGCATGATAGCACTGACTGAAGCCATAGCTATTGGAAGAACTTTTGCATCTATGAAGGACTATCAACTCGATGGAAACAGAGAAATGGTTGCATTAGGAACAATGAATGTTGTTGGTTCGATGACTTCATGTTATGTGGCAACCGGTTCTTTCTCTCGGTCGGCGGTAAACTACATGGCTGGCTGCCAAACTGCGGTATCTAATATTGTGATGTCTGTGGTTGTTTTCTTAACGCTGCAATTCCTAACTCCTCTTTTTAAGTACACTCCAAACGCCATTCTCGCGGCAATCATCATTTCTGCTGTCATCAGCCTTATAGACTATCAGGCAGCAATTTTGATTTGGAAGATCGATAAATTCGATTTCATTGCTTGCATGGGAGCATTCTTTGGGGTCGTTTTCGTCTCGGTTGAGATAGGACTTCTAATTGCTGTTTCTATATCTTTTGCGAAAATCCTATTACAAGTGACAAGGCCAAGAACTGCTATTTTGGGGAAGATTCCTCGGACAACTGTCTATAGAAACATCCAACAATATCCAGAAGCTAGTAGGATTCCAGGTGTAATGATTGTAAGAGTTGATTCCGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGTTAACGGATGAAGAAACTGTGAAAGGAGACTACCACACAAGAATTCAGTTTTTGATAGTTGAAATGTCACCTGTTACTGATATTGATACAAGTGGCATCCAAGCCTTTGAAGAGTTACATAGAAGTCTTGAAAAAAGAAGTGTTCAACTTGTTCTGGCAAATCCTGGTTCAGCAGTGACAGACAAACTTTACACATCAAATTTTGCTAACATAATAGGCCAAGACAAGATTTTCCTCACAGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGCTGGATGTGAATCCATGA 1956 0.4013 MDSPTHKETERNQITPLDDEAPNAYKVAIPPKQNLFKEFKYTVKETFFADDPLRSFKDQTKSRKFILCIEAIFPIFSWGRGYNLKKFRGDIIAGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLMGTLLSNEIDPVTHKEEYQRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIGLQQLKGFLGIKTKMFTTKTDIVSVLHSVFASAKHGWNWHTILIGASFLCFLLLAKFIGKKNNKFFWVPAIAPLISVVLSTFFVFLTRADKQGVEIVNHIEKGINPSSVHDIYFSGEYLGKGFKIGVTAGMIALTEAIAIGRTFASMKDYQLDGNREMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVFLTLQFLTPLFKYTPNAILAAIIISAVISLIDYQAAILIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASRIPGVMIVRVDSAIYFSNSNYVKERILRWLTDEETVKGDYHTRIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKRSVQLVLANPGSAVTDKLYTSNFANIIGQDKIFLTVAEAVAYCSPKLDVNP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04483 651 Gene3D STAS domain 501 646 IPR036513 -
Vivi3g04483 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Vivi3g04483 651 SUPERFAMILY SpoIIaa-like 523 644 IPR036513 -
Vivi3g04483 651 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vivi3g04483 651 PANTHER SULFATE TRANSPORTER 33 644 IPR001902 GO:0016020|GO:0055085
Vivi3g04483 651 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Vivi3g04483 651 Pfam Sulfate permease family 87 469 IPR011547 GO:0016020
Vivi3g04483 651 Pfam STAS domain 522 639 IPR002645 -
Vivi3g04483 651 FunFam Sulfate transporter 31 501 646 - -
Vivi3g04483 651 NCBIfam sulfate permease 74 639 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04483 Vivi-Chr3 80866718 80871114 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04483 1 647 Inorganic Solute Cotransporters AT1G22150 74.159 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04483 K17470 - gmx:100804208 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04483 3 80866718 80871114 Vivi3g04483 3 80866718 80871114 ECH
Vivi7g01133 7 58405546 58409528 Vivi3g04483 3 80866718 80871114 PCT