Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04481 ATGGATTATGTAGATACAAGTGTTGTTCCTCCTCTTATCTATGCTATGATGGGAAGTTCAAGAGAAATTGCAATAGGACCTGTAGCTGTAGTTTCACTGCTACTATCTTCTCTATGTCACAAAGTGGTTGATCCAGATTTAAATCATGATGCTTACAGAAATTTTGTCTTCACTGTAACATTTTTTGCTGGAATCTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGATTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTAGGATTCATGGCAGGTGCAGCCATCATGATTGGTCTTCAACAGCTTAAGGGATTGCTTGGGATTAGTAACTTTACTAATAAATCGGATGTTGTTTCGGTTTTGGAATCGGTTTACAAATCACTCTGTCACCAAATTCCCTCCGGAGAATGGTACCCTCTGAATTTTGTGATTGGATGTTCATTTCTGATTTTCCTTTTGTTTGCAAGATTCATGGGAAAAAGAAACAAAAAGCTTTTTTGGTTACCAACTATTGCTCCTCTTGTATCAGTTATCTTATCAACTTTGATTGTGTATATTTTCAAAGCTGATAAAAATGGGGTTAATATAGTAAAACATGTGAAAAAAGGGCTTAATCCAAGTTCAGTTCATCAATTACAACTCAATGGGGAACATGTTGGAGAAGCAGCAAAAATTGGATTGATTTCTGCTGTTATTGCACTCACTGAAGCAATGGCTGTTGGTAGATCTTTTGCTTCAATTAAAGGATACCAACTTGATGGAAACAAAGAAATGTTGGCAATGGGTTGTGGGAACATTGCTGGCTCTTTCACTTCATGCTATGTTGCAACTGGTTCATTTTCAAGAACTGCAGTAAATTTCAGTGCAAGATGTCAATCATCAATATCAAATATTGTGATGGCAGTGACAGTGATTCTATGTTTGGAGTTATTTACAAGGCTGTTATATTACACGCCTATGGCTATACTTGCTTCCATAATTCTCTCAGCACTTCCAGGATTAATTGACATAAGAGAAGCCTGTTATATATGGAAGGTTGACAAAGTTGATTTCCTTGCTTGCATTGGTGCTTTCTTAGGTGTATTGTTTGTATCGGTTGAAACCGGTCTTATTATCGCAGTGTCAATCTCATTTGCGAAGATAGTAATCCAATCAATTCGACCTGGAATAGAAGTTCTAGGTAGAATTCCAACAACAGAAGCTTTTTGTGATGTTAGTCAATATCCCATGGCTACAAGTACTCCAGGCATTTTAGTCATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATGTTGTTAGAGAAAGGATACTCAAGTGGATCACTGAAGAAGATGGACTTAAAGAAACTCAAACTACCAAAGGAAGAGTCCAAGCAGTAATATTGGAAATGACCAATTTGATGAATGTTGATACTTCTGGAATTATAGTACTAGAGGAACTGCACAAGAGGTTGCTCTCAAGAGGCATAAAATTTTGTATGGTGAATCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCACACTTTGTGGATAATATTGGGAAAGAATGGATTTTTCTTACAGTTGCTGAAGCTGTGGATGCATGCTTATCTTGTAAATATGCTGACCCATGA 1626 0.3733 MDYVDTSVVPPLIYAMMGSSREIAIGPVAVVSLLLSSLCHKVVDPDLNHDAYRNFVFTVTFFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGISNFTNKSDVVSVLESVYKSLCHQIPSGEWYPLNFVIGCSFLIFLLFARFMGKRNKKLFWLPTIAPLVSVILSTLIVYIFKADKNGVNIVKHVKKGLNPSSVHQLQLNGEHVGEAAKIGLISAVIALTEAMAVGRSFASIKGYQLDGNKEMLAMGCGNIAGSFTSCYVATGSFSRTAVNFSARCQSSISNIVMAVTVILCLELFTRLLYYTPMAILASIILSALPGLIDIREACYIWKVDKVDFLACIGAFLGVLFVSVETGLIIAVSISFAKIVIQSIRPGIEVLGRIPTTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANVVRERILKWITEEDGLKETQTTKGRVQAVILEMTNLMNVDTSGIIVLEELHKRLLSRGIKFCMVNPRWLVIHKLKVAHFVDNIGKEWIFLTVAEAVDACLSCKYADP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04481 541 ProSiteProfiles STAS domain profile. 425 533 IPR002645 -
Vivi3g04481 541 FunFam Sulfate transporter 31 388 536 - -
Vivi3g04481 541 Pfam Sulfate permease family 6 356 IPR011547 GO:0016020
Vivi3g04481 541 Gene3D STAS domain 388 535 IPR036513 -
Vivi3g04481 541 NCBIfam sulfate permease 6 529 IPR001902 GO:0016020|GO:0055085
Vivi3g04481 541 CDD STAS_SulP_like_sulfate_transporter 409 526 - -
Vivi3g04481 541 SUPERFAMILY SpoIIaa-like 413 533 IPR036513 -
Vivi3g04481 541 PANTHER SULFATE TRANSPORTER 6 533 IPR001902 GO:0016020|GO:0055085
Vivi3g04481 541 Pfam STAS domain 409 529 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04481 Vivi-Chr3 80817506 80821818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04481 6 537 Inorganic Solute Cotransporters AT5G10180 63.415 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04481 K17469 - gmx:100805269 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04481 3 80817506 80821818 Vivi3g04481 3 80817506 80821818 ECH
Vivi7g01132 7 58405546 58410000 Vivi3g04481 3 80817506 80821818 PCT