Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04480 ATGAATTCATTATTACCCTCAGATGCTTTCAACATGAGAGTCACAGAAGATGAACATCATCTTCACCTTGAAGATACTCATCAAATAGAGAGATCACACTGGATGCTAAACACTCCTAATCCACCTCCTCTATGGAAAAAACTCATCACTCCACTCAAGAATAACAAGCTCTTTTCTTCATCCAAAAAGAGAACTTGCAATGAAAATGCTTTTTCTTTCTTTAGTAGTTTGTTTCCAATCCTTAACTTGTTCAAAAACTATGATGCTTTCAAGTTTAAAGATGATCTTCTAGCAGGATTAACTCTAGCTAGTCTTAGCATACCCCAGAGTATAGGATATGCTAATTTAGCAAAACTTGACCCTCAATATGGATTATATACAAGTGTTGTTCCTCCTCTTATCTATGCTATGATGGGAAGTTCAAGAGAAATTGCAATAGGACCTGTAGCTGTAGTTTCACTGCTACTATCTTCTCTATGTCACAAAGTGGTTGATCCAGATTTAAATCATGATGCTTACAGAAATTTTGTCTTCACTGTAACATTTTTTGCTGGAATCTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGATTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTAGGATTCATGGCAGGTGCAGCCATCATGATTGGTCTTCAACAGCTTAAGGGATTGCTTGGGATTAGTAACTTTACTAATAAATCGGATGTTGTTTCGGTTTTGGAATCGGTTTACAAATCACTCTGTCACCAAATTCCCTCCGGAGAATGGTACCCTCTGAATTTTGTGATTGGATGTTCATTTCTGATTTTCCTTTTGTTTGCAAGATTCATGGGAAAAAGAAACAAAAAGCTTTTTTGGTTACCAACTATTGCTCCTCTTGTATCAGTTATCTTATCAACTTTGATTGTGTATATTTTCAAAGCTGATAAAAATGGGGTTAATATAGTAAAACATGTGAAAAAAGGGCTTAATCCAAGTTCAGTTCATCAATTACAACTCAATGGGGAACATGTTGGAGAAGCAGCAAAAATTGGATTGATTTCTGCTGTTATTGCACTCACTGAAGCAATGGCTGTTGGTAGATCTTTTGCTTCAATTAAAGGATACCAACTTGATGGAAACAAAGAAATGTTGGCAATGGGTTGTGGGAACATTGCTGGCTCTTTCACTTCATGCTATGTTGCAACTGGTTCATTTTCAAGAACTGCAGTAAATTTCAGTGCAAGATGTCAATCATCAATATCAAATATTGTGATGGCAGTGACAGTGATTCTATGTTTGGAGTTATTTACAAGGCTGTTATATTACACGCCTATGGCTATACTTGCTTCCATAATTCTCTCAGCACTTCCAGGATTAATTGACATAAGAGAAGCCTGTTATATATGGAAGGTTGACAAAGTTGATTTCCTTGCTTGCATTGGTGCTTTCTTAGGTGTATTGTTTGTATCGGTTGAAACCGGTCTTATTATCGCAGTGTCAATCTCATTTGCGAAGATAGTAATCCAATCAATTCGACCTGGAATAGAAGTTCTAGGTAGAATTCCAACAACAGAAGCTTTTTGTGATGTTAGTCAATATCCCATGGCTACAAGTACTCCAGGCATTTTAGTCATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATGTTGTTAGAGAAAGGATACTCAAGTGGATCACTGAAGAAGATGGACTTAAAGAAACTCAAACTACCAAAGGAAGAGTCCAAGCAGTAATATTGGAAATGACCAATTTGATGAATGTTGATACTTCTGGAATTATAGTACTAGAGGAACTGCACAAGAGGTTGCTCTCAAGAGGCATAAAATTTTGTATGGTGAATCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCACACTTTGTGGATAATATTGGGAAAGAATGGATTTTTCTTACAGTTGCTGAAGCTGTGGATGCATGCTTATCTTGTAAATATGCTGACCCATGA 1989 0.3695 MNSLLPSDAFNMRVTEDEHHLHLEDTHQIERSHWMLNTPNPPPLWKKLITPLKNNKLFSSSKKRTCNENAFSFFSSLFPILNLFKNYDAFKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSLLLSSLCHKVVDPDLNHDAYRNFVFTVTFFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGISNFTNKSDVVSVLESVYKSLCHQIPSGEWYPLNFVIGCSFLIFLLFARFMGKRNKKLFWLPTIAPLVSVILSTLIVYIFKADKNGVNIVKHVKKGLNPSSVHQLQLNGEHVGEAAKIGLISAVIALTEAMAVGRSFASIKGYQLDGNKEMLAMGCGNIAGSFTSCYVATGSFSRTAVNFSARCQSSISNIVMAVTVILCLELFTRLLYYTPMAILASIILSALPGLIDIREACYIWKVDKVDFLACIGAFLGVLFVSVETGLIIAVSISFAKIVIQSIRPGIEVLGRIPTTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANVVRERILKWITEEDGLKETQTTKGRVQAVILEMTNLMNVDTSGIIVLEELHKRLLSRGIKFCMVNPRWLVIHKLKVAHFVDNIGKEWIFLTVAEAVDACLSCKYADP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04480 662 CDD STAS_SulP_like_sulfate_transporter 530 647 - -
Vivi3g04480 662 PANTHER SULFATE TRANSPORTER 58 654 IPR001902 GO:0016020|GO:0055085
Vivi3g04480 662 SUPERFAMILY SpoIIaa-like 534 654 IPR036513 -
Vivi3g04480 662 Pfam STAS domain 530 650 IPR002645 -
Vivi3g04480 662 Pfam Sulfate permease family 92 477 IPR011547 GO:0016020
Vivi3g04480 662 FunFam Sulfate transporter 31 509 657 - -
Vivi3g04480 662 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Vivi3g04480 662 ProSiteProfiles STAS domain profile. 546 654 IPR002645 -
Vivi3g04480 662 Gene3D STAS domain 509 656 IPR036513 -
Vivi3g04480 662 NCBIfam sulfate permease 79 650 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04480 Vivi-Chr3 80817506 80822313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04480 28 658 Inorganic Solute Cotransporters AT5G10180 61.224 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04480 K17469 - gmx:100805269 1026.93