Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04466 ATGGACATATACGAGCCATTCCAGCAAGTTAGCATGTGGGGTGATAACTTTAAAGTTGAAGGTGGTTTGAATTCAATTGCTTCTTCACCAATGTTAATGGTGAACACTAGTACCATAGAGAACAAGAGTGAATATGTTCCTCATGAACCAAGAGAGCCTTCTGGAGCTGATCAAGAGACTACAGATCATAAGGTGCTAAGACGGCTCGCTCAGAATCGAGAGGCTGCTAGGAAAAGTCGATTGCGCAAAAAGGCTTATGTTCAACAATTAGAAACAAGCAGATTGAAGCTCATGCAACTAGAGTTGGAGATTGGAAGAGCAAGAAAGCAGGGTATGTGCACTGGAAACTCATTAGATACAAGTTTTATGGGATCATCTGAAACAATAAATCCAGGAATTGTCGCGTTTGAAATCGAATATGGAAATTGGGTGGACGAGAGTCATAGGCGTAACAATGAGCTCAGAAGTGTGTTTCAAGCTAACGCGCCCGAAGTGCAGCTCAGTCAAGCTGTTCGGAGTGTCTTGGATCATTACGCGGATCTTTTTCGAATGAAAGCAGACGCTGCGAAGGCTGATGTCCTTTATTTAATCTCGGGCGTATGGAAAGCATCGGCCGAACGCCTTTTCTTATGGATCGGAGGATCACGCCCATCACAGCTTCTAAATATAATCGTGCCACAGCTCGAGCTATTGACCGATCCACAAATGGCTGGCATAAAAAAGCTTTGCCTGTGTTCTCAGCAAGCTGAAGATGCTCTTTCGCAAGGACTCGATAAACTCCAGCAGAGTCTTGTACAAGATATGTCAGTTGATCCATTCAGTGCAGTAAATCATGGAATGCAAATGGCTTTAGCTATAGGAAAATTTGAAGCGCTAGAAGGTTTCGTAATCCAGGCAGATCACCTTAGGCAGCAAACTTTGATACACATGTCGCGAATTCTGACCACTCACCAAGCTGCTAGAGGCTTGATTGCTCTCGGGGAATACTTTCATCGTCTTCAAACTCTTTGTTCTATTTGGACTTCTCGTCCTCGCAACTCCATGATATCGCCGAAGATTAGTCCTTAG 1068 0.4401 MDIYEPFQQVSMWGDNFKVEGGLNSIASSPMLMVNTSTIENKSEYVPHEPREPSGADQETTDHKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIGRARKQGMCTGNSLDTSFMGSSETINPGIVAFEIEYGNWVDESHRRNNELRSVFQANAPEVQLSQAVRSVLDHYADLFRMKADAAKADVLYLISGVWKASAERLFLWIGGSRPSQLLNIIVPQLELLTDPQMAGIKKLCLCSQQAEDALSQGLDKLQQSLVQDMSVDPFSAVNHGMQMALAIGKFEALEGFVIQADHLRQQTLIHMSRILTTHQAARGLIALGEYFHRLQTLCSIWTSRPRNSMISPKISP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04466 355 Gene3D - 63 113 - -
Vivi3g04466 355 MobiDBLite consensus disorder prediction 44 62 - -
Vivi3g04466 355 Pfam bZIP transcription factor 64 92 IPR004827 GO:0003700|GO:0006355
Vivi3g04466 355 Pfam Seed dormancy control 152 225 IPR025422 GO:0006351|GO:0043565
Vivi3g04466 355 SUPERFAMILY Leucine zipper domain 64 96 IPR046347 GO:0003700|GO:0006355
Vivi3g04466 355 Coils Coil 83 110 - -
Vivi3g04466 355 ProSiteProfiles DOG1 domain profile. 133 343 IPR025422 GO:0006351|GO:0043565
Vivi3g04466 355 PANTHER TRANSCRIPTION FACTOR TGA9 1 346 - -
Vivi3g04466 355 FunFam BZIP family transcription factor 63 112 - -
Vivi3g04466 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 62 97 IPR004827 GO:0003700|GO:0006355
Vivi3g04466 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 67 82 IPR004827 GO:0003700|GO:0006355
Vivi3g04466 355 SMART brlzneu 60 120 IPR004827 GO:0003700|GO:0006355
Vivi3g04466 355 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04466 Vivi-Chr3 80368185 80370491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04466 1 345 Calmodulin-binding Proteins AT1G22070 52.877 2.46e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g04466 DOG1 2.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04466 K14431 - gmx:100775332 509.605