Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04425 ATGGATAAAATAGGTATTGCTAGTTTTGGCAGTAAGGCAAGGCCTTATGTGTTAACAGTTGCGATTCAATTTGGGTTTGCAGGAGCATTCATATTCTCCATGGCCAGTTTCAATACTGGAATGAGTCGTTTTGTGTTCATTGTTTATCGTAATATCATTGCTGCAGTTTCCCTTGCTCCTTTTGCATGGTTTTTTGAAAGGAAAGTTAGGCCAAAGATGACTCTATCTGTCTTTTTGCATATAATGGCGCTCGCACTATTAGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTACATCTGTTTTGACGAATACTGTGCCATCTATAACCTTTTTCTTAGCCGTAATTTTCAGGATTGAACAAGTAAATATTAAGCAGATACGAAGCATAGCAAAGGTGGTTGGAACATTAGTAACATTTGGTGGTGCATTTCTGATGACAGTTTACAAAGGACCACAAATCCACCTTTTTTATTCTCCAAACAATGCTCATCATCATGCTGGAAGTCACGACACTCAAAGTCATAAACATTGGGTATCAGGAACACTCTTTATATTATGTGGTTGTTTCGCTTGGTCATCTTTCTTCATATTACAGTCGATAACGTTGAAAAAGTATCCGGCTGAAATGTCATTGTCTACGTTAATTTGCTTATTTGGTTCTCTCATGAGTAGCGCGGTAGCGTTGGTGGCTGAGCATAACTCTGGTGCGGGGACTTGGGCTCTTGGTTGGAACTTTAGACTCTATGGCCCTCTCTTCACGGGAATAGTTAACTCAGGAATAACATATTATGTGCAAGGGTTGGTAATGCAAAGAAGAGGCCCAGTATTTTTTGCAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCATTTCTATTCGGAGAACAGCTCCACTTGGGCAGTATCATTGGAGCTGTGATTATTGCAATGGGTCTTTATTTTGTGGTGTGGGGTAAAGCCAAAGACTATTCATCAGCCACAACTACTATGCCACCATCATCAGTTACAATGAAGCAAATCGAGACACAACAACTTCCAATTACTTCATCTGATCATGTCTAA 1101 0.3969 MDKIGIASFGSKARPYVLTVAIQFGFAGAFIFSMASFNTGMSRFVFIVYRNIIAAVSLAPFAWFFERKVRPKMTLSVFLHIMALALLEPVIDQGFTFLGMQYTSASFTSVLTNTVPSITFFLAVIFRIEQVNIKQIRSIAKVVGTLVTFGGAFLMTVYKGPQIHLFYSPNNAHHHAGSHDTQSHKHWVSGTLFILCGCFAWSSFFILQSITLKKYPAEMSLSTLICLFGSLMSSAVALVAEHNSGAGTWALGWNFRLYGPLFTGIVNSGITYYVQGLVMQRRGPVFFAAFNPLCMIITCALGSFLFGEQLHLGSIIGAVIIAMGLYFVVWGKAKDYSSATTTMPPSSVTMKQIETQQLPITSSDHV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04425 366 PANTHER WAT1-RELATED PROTEIN 15 336 IPR030184 GO:0016020|GO:0022857
Vivi3g04425 366 Pfam EamA-like transporter family 189 329 IPR000620 GO:0016020
Vivi3g04425 366 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020
Vivi3g04425 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vivi3g04425 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04425 Vivi-Chr3 79738653 79740894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04425 1 365 Nodulin-like Gene Family AT2G37460 45.205 1.90e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04425 - - gmx:100775669 521.931