Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04424 ATGGATAAAATAGGTATTGCTAGTTTTGGCAGTAAGGCAAGGCCTTATGTGTTAACAGTGGCAATTCAATTTGGGTTTGCAGGAGCATTCATATTCTCCATGGCCAGTTTCAATACTGGAATGAGTCGTTTTGTGTTCATTGTTTATCGTAATATCATTGCTGCAGTTTCCCTTGCTCCTTTTGCATGGTTTTTTGAAAGGAAAGTTAGGCCAAAGATGACTCTATCTGTCTTTTTGCATATAATGGCGCTCGCACTATTAGAGCCAGTGATCGATCAAGGATTCACTTTCTTAGGAATGCAATATACATCAGCTTCATTTACATCTGTTTTGACGAATACTGTGCCTTCTATAACTTTTTTCTTAGCCGTAATTTTCAGGATTGAACAAGTAAATATTAAGCAGATACGAAGCATAGCAAAGGTGGTTGGAACATTAGTAACATTTGGTGGTGCATTTCTGATGACAGTTTACAAAGGACCACAAATCCACCTTTTTTATTCTCCAAACAATGCTCATCATCATGCTGGAAGTCACGACACTCAAAGTCACAAACATTGGGTCTCAGGAACACTCTTTATATTATGTGGTTGTTTCGCTTGGTCATCTTTCTTCATATTACAGTCGATAACGTTGAAAAAGTATCCGGCTGAAATGTCATTGTCTACGTTAATTTGCTTATTTGGTTCTCTGATGAGTACCGCGGTGGCGTTGGTGGCTGAGCATAACTCTGGTGCGGGGACTTGGGCTCTTGGTTGGAACTTTAGACTCTATGGCCCTCTCTTCACGGGAATAGTTAACTCAGGAATAACATATTATGTGCAAGGGTTGGTAATGCAAAGCAGAGGCCCAGTATTTTTTGCAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCATTTCTATTCGGAGAACAGCTCCACTTGGGCAGTATCATTGGAGCTGTGATTATTGCAATGGGTCTTTATTTTGTGGTGTGGGGTAAAGCCAAAGACTATTCATCAGCCACAACTACTATGCCAACATCATCAGTTACAATGAAGCAAATTGAGACACAACAACTTCCAATTACTTCATCTGATCATGTCTAA 1101 0.3978 MDKIGIASFGSKARPYVLTVAIQFGFAGAFIFSMASFNTGMSRFVFIVYRNIIAAVSLAPFAWFFERKVRPKMTLSVFLHIMALALLEPVIDQGFTFLGMQYTSASFTSVLTNTVPSITFFLAVIFRIEQVNIKQIRSIAKVVGTLVTFGGAFLMTVYKGPQIHLFYSPNNAHHHAGSHDTQSHKHWVSGTLFILCGCFAWSSFFILQSITLKKYPAEMSLSTLICLFGSLMSTAVALVAEHNSGAGTWALGWNFRLYGPLFTGIVNSGITYYVQGLVMQSRGPVFFAAFNPLCMIITCALGSFLFGEQLHLGSIIGAVIIAMGLYFVVWGKAKDYSSATTTMPTSSVTMKQIETQQLPITSSDHV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04424 366 Pfam EamA-like transporter family 189 329 IPR000620 GO:0016020
Vivi3g04424 366 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020
Vivi3g04424 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vivi3g04424 366 PANTHER WAT1-RELATED PROTEIN 15 336 IPR030184 GO:0016020|GO:0022857
Vivi3g04424 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04424 Vivi-Chr3 79733335 79735604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04424 1 365 Nodulin-like Gene Family AT2G37460 45.479 1.93e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04424 - - gmx:100775669 522.316