Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04422 ATGGATAAAATAGGTTTTGCTAGTTTTAGCAGTAAGGCAAAGCCTTATGTGTTAACAGTGGCAGTTCAATTTGGGTTTGCAGGAGCTTACATCTTTTCCATGGCCAGTTTCAATATTGGAATGAGTCGTTTTGTGTTCATTGTTTATCGTAATATCATTGCTGCAGTTACACTTGCTCCTTTTGCATGGTTTTTTGAAAGGAAAGTTAGGCCAAAGATGACTATCTCTGTCTTTTTGCACATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTGCATCTGTTTTGTCGAATACTGTGCCATCTATAACCTTTTTCTTAGCCATAATTTTCAGGATTGAACAAATAAATATTAAGCAGATACGAAGCATAGCAAAGGTGGTTGGAACATTGGTAACATTTGGAGGTGCATTATTGATGACAGTTTACAAAGGACCACAAATCCACCTTTTTTATTCTCCAAATAATGCTCATCATCATGCTGGAAGTCACGACACTCAAACTCTAAAACATTGGGTCTCAGGAACACTTTTTATATTATGTGGTTGTTTCGCTTGGTCATCTTTCTTCATATTACAGTCAATAACGTTGAAAAAGTATCCCGCTGAAATGTCATTGTCCACCTTAATTTGCTTAGTTGGTTCTCTGATGAGTACCGCGGTGGCGTTGGTGGCTGAGCGTAACTCTGGTGCGGGGACTTGGGCTCTTGGTTGGAACTTTAGACTCTATGGTCCTCTCTACACGGGAATTGTTAACTCAGGAATAACATATTATGTGCAAGGGTTGGTAATGCAAAGCAGAGGCCCAGTATTTTTTGCAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCCTTTCTTTTCGGAGAACAACTCCACTTGGGCAGTATCATTGGAGCTGTGATTATTGCAATGGGTCTTTATTCTGTGGTGTGGGGTAAAGCCAAAGACACTACTACAACGCCACCATCACCAGTTACAATGAAGCAAATTGAGACACAACAACTCCCAATTACTTCATCTGATCATGTCTAA 1089 0.3985 MDKIGFASFSSKAKPYVLTVAVQFGFAGAYIFSMASFNIGMSRFVFIVYRNIIAAVTLAPFAWFFERKVRPKMTISVFLHIMALAFLEPVIDQGFTFLGMQYTSASFASVLSNTVPSITFFLAIIFRIEQINIKQIRSIAKVVGTLVTFGGALLMTVYKGPQIHLFYSPNNAHHHAGSHDTQTLKHWVSGTLFILCGCFAWSSFFILQSITLKKYPAEMSLSTLICLVGSLMSTAVALVAERNSGAGTWALGWNFRLYGPLYTGIVNSGITYYVQGLVMQSRGPVFFAAFNPLCMIITCALGSFLFGEQLHLGSIIGAVIIAMGLYSVVWGKAKDTTTTPPSPVTMKQIETQQLPITSSDHV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04422 362 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020
Vivi3g04422 362 Pfam EamA-like transporter family 189 329 IPR000620 GO:0016020
Vivi3g04422 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 333 - -
Vivi3g04422 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vivi3g04422 362 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04422 Vivi-Chr3 79652538 79656887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04422 11 358 Nodulin-like Gene Family AT1G44800 47.851 9.05e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04422 - - gmx:100775669 536.184