Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04415 ATGGGTGCATGGTTAAGAACTGCAAAGCCATATTTACTACTCTTGGCAGTTCAATTTGGTTCTGCAGGAATGTTTATTTTTGCCATGGATGCTATCAAAAAAGGAATGAGCCATTACGTTTTCATCGTCTACCGTAATGCTCTCGCCACTGTAACATTAGCTCCATTCGCATTTTATCTTGAAAGGAAAATTAGACCGAAGATGAGTCTCCGTGTATTTTCAGAGATTATGTTACTGGCTTTCTTCGAAATAATACTGGATCAATGTTTTGCCTTGTTGGGAATGAAATTAACGTCCGCTTCGTTCCTTTCCGCTGTGATGAACTCTGCGCCCTCCATTACTTTTCTGTTTGCAGTCATTTTAAAATTGGAGCACATGAAGATAAAGGAAATAGCATGTCAAGCAAAAATGATTGGTACTGCAATAACATTTGCCGGAACATTGTTAATGGCTCTATACAAAGGCCCTGTAGTTAGCGTTGTGAAGTCAACTATTAGTCATGCTACCAACCAGTCTGAGATTGTGAAAGATTCCAGTAACAACCGGTGGATCGTAGGAACATGTTTCCTCCTTATTGGCTGCGCTGGTTTTTCCGCCTTTTACATATTGCAGGCCATAACATTGAGAAAGTACCCTGCACCGATGTCTCTGGCAACATGGGTTTGTTTCGTTGGCGCGCTTCAAAGCTTTGTGGTGACTATTATTGCCGAGCGTCACAACTCTCATGCTTGGGCTCTTGGTTGGGATTCACGACTCTTTGCCCCAGCTTATGCGGGGATAGTAACATCAGGAGTGCAGTACTACATACAAGGAGTGGTTATGAAAGCTATGGGTCCAGTTATTGTAACTGCATTCAATCCGCTGCGAATGATCATTGTAACGGCCTTAGCATGCATCATTCTTTCCGAGCAGCTCTTTCTTGGGAGTATTATTGGAGCAATAGTGGTGGTTCTTGGGCTTTATTTAGTTGTGTGGGGAAAATCGAAAGAACAGAAAGCCCGGAATAATGATATTCATATGGCAGAGTCACCTACTAAGGAGAACCAATTACAAGACCTACATCAGTTACCTGTCACAGCTCCTAAAAATGATAGTAATAAGGCTCAATTGGTCATGCATGATGAAGAAACATGTTACAATTGTGGACGAAATTGA 1155 0.4182 MGAWLRTAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNALATVTLAPFAFYLERKIRPKMSLRVFSEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFLFAVILKLEHMKIKEIACQAKMIGTAITFAGTLLMALYKGPVVSVVKSTISHATNQSEIVKDSSNNRWIVGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFVGALQSFVVTIIAERHNSHAWALGWDSRLFAPAYAGIVTSGVQYYIQGVVMKAMGPVIVTAFNPLRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEQKARNNDIHMAESPTKENQLQDLHQLPVTAPKNDSNKAQLVMHDEETCYNCGRN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04415 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 329 - -
Vivi3g04415 384 PANTHER WAT1-RELATED PROTEIN 10 340 IPR030184 GO:0016020|GO:0022857
Vivi3g04415 384 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Vivi3g04415 384 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Vivi3g04415 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04415 Vivi-Chr3 79509440 79511262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04415 5 377 Nodulin-like Gene Family AT2G39510 43.651 1.63e-105 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04415 - - psat:127084085 682.945