Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04414 ATGGAGGATCAAAATGCTATTGAGAAGGTTAACAATGGTTCACTACTTCGGAAGATGAAACCTTACCTTGCTATATTGTCTCTACAATTTGGTTACTCTGGGATGTATATCATTACTATGGTTTCTTTCAAACATGGTATGAGTCATTGGATTCTCTCGGTGTACCGTCATGTTGTGGCCGCAATTATAATCATCCCTTTCGCGCTTGTTCTCGAAAGGAAAATAAGGCCAAAGATGACTCTTCCTATCTTCTTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTACTAGATCAAAACTTATACAACATGGGAATGAAGATGACTTCAACAACGTTTGCATCTGCCACTGTTAATGTCCTTCCTGCTCTAACTTTTATAATGGCACTCACTTTCAGGTTAGAATCGGTAAACTGGAGAAAATTTCATAGCGTAGCCAAAGTAATTGGAACGGTTATAACCGTTTCAGGAGCTATGGTTATGACTTTGTACAAAGGACCTGCCTTCCAGTTCTTAAAAGGAGGAGGAATCAGCCACCACAACGACGCTGCGGCCGATGAACCTATGCAACAAAATTGGGTGATGGGTCCAATTATGCTCATAGGAAGTTGTGCTAGTTGGGCTGGATTCTTTATTTTGCAATCATTCACATTGAAGAAATATCCAGCAGAGCTATCACTCACAGCATGGATTTGTGTCATGGGAATCATTGAGGGTTCAATTGCATCATTTATATTTGAAAGGGACATGAGTGTGTGGGTCATAGGTTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGTGTGATATGCTCTGGAATGGCATATTATATACAAGGAGTTGTAACAAGAGAACGTGGACCAGTTTTTGTAACTTCTTTCAGTCCATTATGCATGATTATCACTGCTGCATTGGGTTCACTTGTCTTAGCCGAACAAGTTCATCTCGGAAGTATATTTGGAGCTATACTCATTGTTGCTGGACTTTACACCGTGGTGTGGGGAAAAAGCAAAGATCGTCGTGAAAGCGCGAAAGAAATCCAAGAATTACCAATCAAGGATGGTACAAATTCAGAGACAGACATTTTTCATGGAATTGAGATTAATGTTGCAGACGAAAAGTTGAAAAAAGGAGCAGCAAAAAATGTTCCAACATAA 1158 0.4033 MEDQNAIEKVNNGSLLRKMKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIIPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPALTFIMALTFRLESVNWRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQFLKGGGISHHNDAAADEPMQQNWVMGPIMLIGSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASFIFERDMSVWVIGWDSRLLACVYSGVICSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVAGLYTVVWGKSKDRRESAKEIQELPIKDGTNSETDIFHGIEINVADEKLKKGAAKNVPT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04414 385 PANTHER WAT1-RELATED PROTEIN 21 343 IPR030184 GO:0016020|GO:0022857
Vivi3g04414 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 155 - -
Vivi3g04414 385 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Vivi3g04414 385 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Vivi3g04414 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04414 Vivi-Chr3 79434115 79438095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04414 12 365 Nodulin-like Gene Family AT4G08300 66.017 1.02e-170 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04414 - - gmx:100811114 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04414 3 79434115 79438095 Vivi3g04414 3 79434115 79438095 ECH