Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04397 ATGGCTTCTTACTACTTCCTCTTGTTTGTTCTTGTAGCTGCTTTTGCACTTTCTAAAGCAAATGGCAATGAGTTATGCACAGATTTCTATTGCGGCAGTTGCCCGAAACTGTTGTCTATAGTGAATCAAGGAGTCATAAAAGCCATTCGTAATGAAGCTCGCATAGGAGCTTCCATACTTAGATTGCATTTCCATGACTGCTTTGTAAACGGCTGTGATGGATCAATATTGTTGGATGATACAAAGAGTTTCATAGGAGAAAAAACAGCAGCAGCCAACAATAATTCAGCTAGGGGATTCAACGTGATTGATGATATTAAAGCCAACGTTGAGAAAGCATGCCCAAGAACTGTGTCTTGTGCTGATATTCTTGCTCTGGCTGCTCGAGACTCTGTTGTTACTCTAGGTGGCCCTTCCTGGGAAGTAGGATTGGGAAGAAGAGATTCAATCACAGCTAGTAGAGCTGATGCCAATAAGTCTATTCCTGCACCCTCTCTCAATCTTGATCAACTCAAATCAAATTTTGCTAACCAAGGACTCTCTGAGAAGAACTTGGTAGCTCTTTCAGGTGCACACACAATCGGGCTAGCCAGATGTACGCAGTTTCGAGCACACATCTACAATGATTCCAACATTGATCCTTCATTTGCCAAGTCACTGCAGAGAAAGTGTCCCAGAACTGGAAATGACAACCTTCACCAGCCATTAGACTTTCAAACCCCAACTCATTTCGATAACCTATACTACAAGCATTTACTTGTTAAAAAGGGTCTTCTCCATTCTGACCAAGAATTGTTCAATGGGAATCCTACAACTGATAAACTGGTGCAGAAATATGCTAATGATAATGAAGAATTTTTCGAAGACTTTGCCAAGGGTATGGTCAAAATGAGTAATATCAATCCCCTCACAGGAAACAAAGGACAGATCAGAATCAATTGCAGAAAACACAACTGA 957 0.4107 MASYYFLLFVLVAAFALSKANGNELCTDFYCGSCPKLLSIVNQGVIKAIRNEARIGASILRLHFHDCFVNGCDGSILLDDTKSFIGEKTAAANNNSARGFNVIDDIKANVEKACPRTVSCADILALAARDSVVTLGGPSWEVGLGRRDSITASRADANKSIPAPSLNLDQLKSNFANQGLSEKNLVALSGAHTIGLARCTQFRAHIYNDSNIDPSFAKSLQRKCPRTGNDNLHQPLDFQTPTHFDNLYYKHLLVKKGLLHSDQELFNGNPTTDKLVQKYANDNEEFFEDFAKGMVKMSNINPLTGNKGQIRINCRKHN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04397 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 FunFam Peroxidase 28 171 - -
Vivi3g04397 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 Gene3D Peroxidase, domain 2 162 297 - -
Vivi3g04397 318 Gene3D - 28 315 - -
Vivi3g04397 318 FunFam Peroxidase 162 297 - -
Vivi3g04397 318 CDD secretory_peroxidase 28 316 IPR033905 GO:0004601|GO:0042744
Vivi3g04397 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 PANTHER PEROXIDASE 72-RELATED 19 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi3g04397 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04397 Vivi-Chr3 79110027 79111304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04397 24 318 Peroxidase AT5G05340 61.074 3.67e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04397 K00430 - gmx:100793973 453.366