Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04392 ATGTCACCGTCTGCCGGAGTCCATGTCCCCCTCCTGACCGGAAATAATCCGGCGGTGAAACATGGTTCGATTCCTGGTGCAGTATTTAACGTCGCCACAAGCATAATTGGCGCTGGAATCATGTCAATCCCGGCCGTTCTTAAAGTTCTCGGCGTTTTTCCCTCATTCGCCTTGTTTCTAATCGTGGCGGTTCTAGCTGAAGTCTCAGTAGAATTTCTCCTGCGTTTTACACATGCTGGTGAAACGACGACGTACGCCGGCGTCATGAAGGAAGCTTTTGGTTCAGCTGGAGCATTAACCGCTAAAGTTTTTATCATAATCAACAACTTAGGCGTTTTAATTCTCTTTCTTATTATCATCGGGGATGTTCTATCTGGAAAGGAAGATGGAGATGAAGTGTTTTTGGGAATTTTGCAAGAGTGGTTTGGGATTCACTGGTGGAATTCCAGAGAAGTTGCTCTTTTCGTCACCTTGGTTGTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTTGAATCCTTGAAGTATAGTTCTGCAGTATCAACTCTTCTTGCTGTGGCATTTGTTGTCATTTGTTCTGGGTTAGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAACTGGTTCCTCGGTTAGACTACCAGACGTCTTTCTTTGATTTGTTCACTGCAATTCCTGTTGTAGTCATAGCATTTACGTTTCATTTCAATGTGCATCCTATTGCATTTGAGCTTGCAAAGCCATCTGATATGAAAACAGCAGCTCGATTAGCAATAATGTTTTCTGCGGTTATCTACTTTATAATTGGTTTATTTGGCTACCTCTTATTTGGAGATTCAATACAATCAGACATTCTAATCAACTTTGATCAGAATGCTGATTCTGCCGTTGGTTCATTGTTCAATAGTTTAATTCGTGTAAGCTATGCACTCCACGTTATGCTGGTATTCCCTGTTGTGAATTTCTCTTTAAGAGCCAACATTGATGAGCTCTTCTTCCCTAATAAGGCTCTACTAGCCACGAGCACAGACAACAAGAGATTTGTGATTCTCACTCTTTTGCTCTTAGTATTCTCCTATCTTGCTGCTATAGCAATACCAGATATTTGGTACTTCTTTCAGTTTCTAGGATCAACAACTGCACTGTGCCTTGCCTTTATTTTCCCTGGCTCTATAGTTTTAAGGGATGCTCTTGGAATATCAACAAGAAAGGACAAAATAATAGCACTTGGTATGATTATACTTGCTGTTGGGACAAGTACAATTGCAATTTCCACCAACATATACAATGCTTTGGGTAGCAAGTCATAG 1317 0.41 MSPSAGVHVPLLTGNNPAVKHGSIPGAVFNVATSIIGAGIMSIPAVLKVLGVFPSFALFLIVAVLAEVSVEFLLRFTHAGETTTYAGVMKEAFGSAGALTAKVFIIINNLGVLILFLIIIGDVLSGKEDGDEVFLGILQEWFGIHWWNSREVALFVTLVVVMLPLVLYKRVESLKYSSAVSTLLAVAFVVICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAIPVVVIAFTFHFNVHPIAFELAKPSDMKTAARLAIMFSAVIYFIIGLFGYLLFGDSIQSDILINFDQNADSAVGSLFNSLIRVSYALHVMLVFPVVNFSLRANIDELFFPNKALLATSTDNKRFVILTLLLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGSIVLRDALGISTRKDKIIALGMIILAVGTSTIAISTNIYNALGSKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04392 438 Pfam Transmembrane amino acid transporter protein 22 420 IPR013057 -
Vivi3g04392 438 PANTHER AMINO ACID TRANSPORTER 19 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04392 Vivi-Chr3 79035841 79037953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04392 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 56.552 2.57e-164 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04392 - - gmx:100815694 654.44