Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04391 ATGTCCCCGTCTGCCGGAGTTCAAGCCCCCCTCTTGACTGGATCCTCTCCGGCGGCGGGCCGCGGTTCAATCCCCGGCGCCGTATTCAATGTTGCCACGAGCATAATCGGCGCCGGAATCATGTCAATCCCGGCGATTCTTAAAGTCCTCGGCGTTTTCCCCTCTTTCGCCTTAATTGCAATCGTGGCTGTGCTAGCCGAAGTTTCGGTGGATTTTCTCATGCGCTTTACACATGCCGGTGACACGACGACGTACTCCGGCGTCATGAAGGAAGCTTTCGGGCCCGCTGGAGCATTAGCCGCTCAAGTTTGTGTAATAGTCACCAACTTTGGGGGTTTAATTCTCTTCCTTATTATTATCGGAGATGTTTTATCTGGAAAGGTAAGTGGAGATGAAGTGCACTTGGGAATTTTGCAAGAGTGGTTTGGTATTCACTGGTGGAATTCCAGGGAAGTTGCTCTTCTCGTCACCTTGGTTGTTGTTATGCTTCCATTGGTCTTGTTCAAAAGTGTAGAATCCTTGAAGTACAGTTCTGCAATATCAACTCTTCTTGCTGTGGTGTTTGTTGCCATTTGTTCCGGGTTGGCTATTGTTGCTTTGGTGCAAGGAAGAACACAAACTCCTAAACTGGTTCCTCGGTTAGACTACCAGACATCTTTCTTTGATTTGTTCACTGCAGTTCCTGTTGTAGTCTCAGCATTCACATTTCATTTCAATGTGCATCCTATTGGATTTGAGTTTGCAAAGCTATCTGATATGAAAACTGCAGTTCGATTAGCAATAATGTTTTGTGCTGTTACCTACTTTATAATTGGTTTATTTGGCTACCTCTTATTTGGAGATTCAACACAATCCGACATTCTAATCAATTTCGATCGAAGTTCTGATTCTGCTGTCGGTTCATTGTTCAATGATTTAATTCGTGTAAGCTACGCGCTCCACGTTATGCTGGTATTCCCTATTGTGAATTTCTCTTTAAGAACCAACATTGATGAGCTCTTATTCCCCAAGAAGGCTCTACTAGCCACGGACAACAAGAGATTTGTGATTCTCACTCTTGTGCTCTTAGTATTCTCCTATCTAGCTGCTATAGCAATACCAGATATTTGGTACTTCTTTCAGTTTTTAGGATCAACAACTGCATTGTGCCTTGCCTTTATTTTCCCTGGCACTATTGTATTAAGGGATGCTCTTGGAATATCAACTAGAAAGGACAAAATAATAGCACTTGGTATGATTATACTTGCCGTAGTGGCAAGTGCAATTGCAATTTCCACCAACATATACAATGCTTTAAGTAGTAAGTCATAA 1311 0.4317 MSPSAGVQAPLLTGSSPAAGRGSIPGAVFNVATSIIGAGIMSIPAILKVLGVFPSFALIAIVAVLAEVSVDFLMRFTHAGDTTTYSGVMKEAFGPAGALAAQVCVIVTNFGGLILFLIIIGDVLSGKVSGDEVHLGILQEWFGIHWWNSREVALLVTLVVVMLPLVLFKSVESLKYSSAISTLLAVVFVAICSGLAIVALVQGRTQTPKLVPRLDYQTSFFDLFTAVPVVVSAFTFHFNVHPIGFEFAKLSDMKTAVRLAIMFCAVTYFIIGLFGYLLFGDSTQSDILINFDRSSDSAVGSLFNDLIRVSYALHVMLVFPIVNFSLRTNIDELLFPKKALLATDNKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGTIVLRDALGISTRKDKIIALGMIILAVVASAIAISTNIYNALSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04391 436 PANTHER AMINO ACID TRANSPORTER 20 419 - -
Vivi3g04391 436 Pfam Transmembrane amino acid transporter protein 21 408 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04391 Vivi-Chr3 79013240 79015324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04391 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.044 7.68e-169 479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04391 3 79013240 79015324 Vivi3g04391 3 79013240 79015324 ECH
Vivi3g04391 3 79013240 79015324 Vivi7g02226 7 85117087 85120432 PCT
Vivi7g02228 7 85138016 85140108 Vivi3g04391 3 79013240 79015324 PCT