Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04390 ATGTCATTGTCAGCCGGAGTTCACATCCCGCTTTTGCCGGGATCAAAATCGGCGGTGGAGCATGGCACCATACCTGGCGCGGTATTCAATGTCGTTAATTCCATAATTGGATCTGGAATCATGTCACTTCCGGCGATCCTAAAAGTTCTCGGAGTGTTTCCTGCTCTGGTTGTCATTCTGATCGTGGCGGTGCTGGCTGAAATCTCCGTCGACTTTCTCATGCGTTTTTCGGACGCCGGAATAAAGCCAACATACGCGAGTGTGATGAAGGAGGCTTTTGGATCCGTTGGAGGATTAACCACTAAAGTTTGTATCATTATTAACAACTTTGGAGGTGCAATTCTGTTACTTATTATAATCGGGGATGTTCTATCTGGAAAGAAAAGTGGAGATGAAGTGCATTTGGGAATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCAGAGAAGTTGCTCTTCTCATCACCTTGGTTGTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCTGCAATATCAACTCTTCTTGCTGTGTCATTTGTTGCCATTTGTTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTGGTTCCTACATTAGACAACCAGAAATCTTTCTTTGATTTGTTCACTGCAGTTCCTGTTGTAGTCACAGCATTCGCATTTCATTTCAATGTGCATCCAATTGGATTTGAGCTCGCAAAGCCATCTGATATGAAAATAGCCGTTCGAATAGCATTAATGTTTTGTGCTGTTATCTACTTTACTATTGGTTTATTCGGCTATCTCTTATTTGGAGAATTAACACAATCAGACATTCTAGTCAATTTCGATCAGAGTGCTGATTCTGCTGTTGGTTCATTCTTCAATAGTTTAATTCGTGTAAGCTATGCACTCCACATTATGCTAGTATTCCCTGTCCTGAATTTCTCTTTGAGAGCCAACGTTGATGAACTATTCTTTCCCAAGAAGCCTCTACTAGCCACAGACAACAAGAGATTTGTGATTCTCACTCTTGTGCTCTTAGTAATCTCCTATCTTGCTGCTATAGCAATACCAGATATTTGGTACTTCTTTCAGTTTCTAGGATCAACAACTGCACTGTCGCTTGCCTTTATTTTCCCTGGCACTATAGTTTTAAGGGATGCTCTTAGAATATCTACAAGAAAGGACAAAATAATAGCACTGGTTATGATAATACTAGCTGTAGTGTCAAGTGCAATTGCAATTTCCACCAACATATACAATGCTTTTTAA 1299 0.4049 MSLSAGVHIPLLPGSKSAVEHGTIPGAVFNVVNSIIGSGIMSLPAILKVLGVFPALVVILIVAVLAEISVDFLMRFSDAGIKPTYASVMKEAFGSVGGLTTKVCIIINNFGGAILLLIIIGDVLSGKKSGDEVHLGILQQWFGIHWWNSREVALLITLVVVMLPLVLYKRVESLKYSSAISTLLAVSFVAICSGLAIVALVQGKTQTPKLVPTLDNQKSFFDLFTAVPVVVTAFAFHFNVHPIGFELAKPSDMKIAVRIALMFCAVIYFTIGLFGYLLFGELTQSDILVNFDQSADSAVGSFFNSLIRVSYALHIMLVFPVLNFSLRANVDELFFPKKPLLATDNKRFVILTLVLLVISYLAAIAIPDIWYFFQFLGSTTALSLAFIFPGTIVLRDALRISTRKDKIIALVMIILAVVSSAIAISTNIYNAF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04390 432 Pfam Transmembrane amino acid transporter protein 22 423 IPR013057 -
Vivi3g04390 432 PANTHER AMINO ACID TRANSPORTER 19 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04390 Vivi-Chr3 78999524 79002309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04390 11 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.920 1.39e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04390 - - gmx:100813056 624.78