Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04384 ATGACATGCGTGGATCAACGAGTTCATATACAATCTTCAGGTTCCACAAAACCATCTCATGACTACACACGAAAGCTTACAACTGGAACAAAGTCACAAGCTCTTTTTCAATTGCATAAGAAATTTAAGGACATGGACGGTAGACTCAAAGATCAGCTTCATAGTGATAATAGTGTAGATTTTACTTCTACGCGGGTTGTCGTAAATGCGGTAGATGTCGGAGGTGACTTTAATAACAAGGAAGAGTTTGATGATTGTGATAGCATGCTCACATGGATTCGTAGGAGTGCAACTAACATTGGTTTTGGTGTGGTAAAAGGAAGATCAGATAATGGTTCGAAAAGAAGAAACGCTTTCATAACAGTGTTGTGCGAAAGAAGCGGGAAATACCATACTCCTCTACATAAGTTTAAAAGAGACGACATGGGTAGTAGAAAATGTGAGTGTCCATTTAAAATCCGTGGTTATATGTTGGCTAGAAAGAAGTGGAAATTTAGGGTTATTTCTGGTTTGCATAACCATGAATTGTGCTCAAAGTTACAAGGTCATCCTAGTGCATGTCGGCTCAAACCGGAAGAGAAGACATGTATTAGTGACATGTTCTTGAATATTGTCCAACCTAAAAATATACTTTCCACATTGAAACGGAAGGAACTCGAAAGCGTATCAAATATAACGCAAGTGTATAACATCCGGTACTGCAATAATAAGGCGATTAGGGGAGATAAAAGTGAGATGCAACAATTGTTGGATGATAACAATTAG 765 0.383 MTCVDQRVHIQSSGSTKPSHDYTRKLTTGTKSQALFQLHKKFKDMDGRLKDQLHSDNSVDFTSTRVVVNAVDVGGDFNNKEEFDDCDSMLTWIRRSATNIGFGVVKGRSDNGSKRRNAFITVLCERSGKYHTPLHKFKRDDMGSRKCECPFKIRGYMLARKKWKFRVISGLHNHELCSKLQGHPSACRLKPEEKTCISDMFLNIVQPKNILSTLKRKELESVSNITQVYNIRYCNNKAIRGDKSEMQQLLDDNN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04384 254 Pfam Transcription factor AFT 131 176 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04384 Vivi-Chr3 78901573 78909054 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g04384 AFT 3.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04384 - - vvo:131658390 525.783