Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04375 ATGGATGTTATAAATTCTACAGTAATATGCACACATCCTTCTGGAAGTTCTCACAGGAGTGTGTGGATGTTAGGAAACCCACTTAGTTCTCCCACTCCTCTTCTCTTTCTGCAGGTCTCACTTATTACTGTAGTTACACAACTCATGGATGCTTGTCTCAGACCACTAGGACAAACCTCCCTTGTATCTCAGATTCTTGGAGGATTGGTATTTGGTCCATCGATGTTGGGGCACAAAGAGATGGTGACAAATATCTTATTCCCTATGAAAGGTTGTCTAATACTTGACACAGTAGCAACTTTCTGCCTCAATTTCTTCTACTTCATAAGTTGTGTAAAGATGGATACTGGAACAGTGCTGAAAACGGAAAAACAAGCCATCACAATTGGTATTTCTGTATTCGCATTTGCATTTGCATTCCCTCTTGGATTATCCTTTGCATTGACCAGTTTTATTTCCATGGACAAAACCCTCGCGTCTGCTCTGCCGTTAATAGCCATATCACAAAGCTTTACGGTATTCATCAGCATCTCTGTCCTTCTAACAGAGCTTAAAATCCTAAACACCAATGTCGGCCGTCTAGCATTATCATCGGCGATGTTTACCGATGTTGTTAGTCTCCCTATGATCACACTTATATTTGCAGTATTGCAGGTTAAACATAGTAATAAGAGTATGCTGACACTACTATGGATCCTTCTATCCATAGCTGTACTCTTGGTTGTTATCTTCTATGTAATAAGGCCGACTATAATATGGTATGCGGGCCGGTTAAATGGAAAACCGGTCGACGAATTCTTCTTTGTCTGTATCATTCTGTGTGTTCTCTTCACTTCATTTTGCAGTGAGTTCATTGGACAGCACTATTCTATGGGACCGATATTTTTAGGCTTGGCTGTTCCTGAAGGGCCGCCTGTAGGATCGACTTTGATATCGAAAATGGAAACGGTTTCTGGTGCTTTTTTGTATCCATTATACCTTGCTGTCAATGGATTGCAGACTGATATATTCAAAATCAACCTTCAGGCTACTTGGATTGTAACTGCCGTCGTGCTAGTTGGTTTTGTCGCAAAGATCATTGCTGTTATTTTACCAGGTTATTATTACAATGTTCCCATGAAAGATTGTCTTGTGATTGGGCTAGTTCTCAATGGCAGAGGTATAGCTGAGCTCTGCATGTACAATTTAATGAAGAACTCCAAGCTATTAACAGGACAACTGTTCTCTTTATTGGTGCTGACCCTTATAGTGATAAATGGTATCATAGCACCACTGGTAAAATTCACATATAATTCTTCATCCGAGTATCATTCCGGAAAAAGAATTTCAATACAACATACAAAGCGAGATTCCGAGCTCCGAATCATGGTATGCTTTAACAAGAATGAAAACATACCAACAATGCTCAACATCATAGAAGCATCTTGTGCAAGCAGAGAGAGCAATATTGAAGTTATAGCACTTCTCCTTGTAGAGCTTCTAGGAAGATCAAGGCCTCTTCTCGTCGCTCACCAACCGCATGACACGCTTCCGGTAACCAATTGTGATTTAACTCAACTCGACAATGCATTGAAGCAATATGCACAGCTCAATGAAGGGTGTGCACGTGTTCAATCATTCACATCAATCTCCGACTTCGATACAATCCACGAGGACGTCTGTCGAATATCCTTCGACAGAAGAGCCAACATTTTGATCATGCCATTCCACAAAAGATGGGAGATAGATGGAACCGTCGAGGTAAAAAATAGAGGAATCCAAACAATAAACACTAACGTCCTCGAAAGAGCGCCTTGTTCAGTCGGAATCCTCATCGACCGAGCTATCTTAAGCGGTTGTCCATCGCTTTTAATCGGTAAATCAACATACTATGTAGCAGTACTCTTCATTGGAGGTGCAGATGATGCCGAAGCATTAGCCTATGCTAGTAGAATGGCTAGGCATGAGTGTGTGAATGTAACAGTTATTCGGTTCCTTGTTTTTGGAGAAGAGAATTCAAAAGACAGAAAATATGAAACTGATCTTGTAGATGAATATAGATATCATAACAATGGAAATACAAGGTTTGAGATAAGTGAAGAAGTTGTGAGAGATGGAATGGAATTTTTTTCTAGTGTAAGAAGAATGGTAGATTGTTTTGATTTAGTTATGGTAGGGAGGGCACATCCACAATCAGTTTTGTTACATGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGGTTGGTGATATGTTGGCTACACAGGATTTTGTGACAAAAGCATCTGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAGATTCATTAACCAAAATGTTATGCCAAATCAAAGGGATCAGCTTGTACATAACGTTCCAATGAATGAACCACCAATACCTTCTTGTACTATTTCAATGGATAAATATGACAGAAAGTAG 2424 0.401 MDVINSTVICTHPSGSSHRSVWMLGNPLSSPTPLLFLQVSLITVVTQLMDACLRPLGQTSLVSQILGGLVFGPSMLGHKEMVTNILFPMKGCLILDTVATFCLNFFYFISCVKMDTGTVLKTEKQAITIGISVFAFAFAFPLGLSFALTSFISMDKTLASALPLIAISQSFTVFISISVLLTELKILNTNVGRLALSSAMFTDVVSLPMITLIFAVLQVKHSNKSMLTLLWILLSIAVLLVVIFYVIRPTIIWYAGRLNGKPVDEFFFVCIILCVLFTSFCSEFIGQHYSMGPIFLGLAVPEGPPVGSTLISKMETVSGAFLYPLYLAVNGLQTDIFKINLQATWIVTAVVLVGFVAKIIAVILPGYYYNVPMKDCLVIGLVLNGRGIAELCMYNLMKNSKLLTGQLFSLLVLTLIVINGIIAPLVKFTYNSSSEYHSGKRISIQHTKRDSELRIMVCFNKNENIPTMLNIIEASCASRESNIEVIALLLVELLGRSRPLLVAHQPHDTLPVTNCDLTQLDNALKQYAQLNEGCARVQSFTSISDFDTIHEDVCRISFDRRANILIMPFHKRWEIDGTVEVKNRGIQTINTNVLERAPCSVGILIDRAILSGCPSLLIGKSTYYVAVLFIGGADDAEALAYASRMARHECVNVTVIRFLVFGEENSKDRKYETDLVDEYRYHNNGNTRFEISEEVVRDGMEFFSSVRRMVDCFDLVMVGRAHPQSVLLHGHDQWSECPELGVVGDMLATQDFVTKASVLVVQQQRMGGRFINQNVMPNQRDQLVHNVPMNEPPIPSCTISMDKYDRK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04375 807 Gene3D - 34 437 IPR038770 -
Vivi3g04375 807 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04375 807 PANTHER CATION/H + ANTIPORTER 9 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04375 Vivi-Chr3 78707146 78712243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04375 5 763 Antiporter Super Family AT2G13620 35.959 7.28e-158 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04375 K26731 - gmx:100779700 1001.5