Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04374 ATGGATATTATAAATTCTACAGTAATATGCACAAGTCCTCCTCTTAATACTCACAAGAGTGTGTGGCAGTATGGCAATCCACTTTCTTCCCCAACTTCTCTTCTCTTTTTGCAGGTCTTTGTTATTACTATAGTCACACAATTCCTGGATATTTGTCTCAGACCACTTGGACAAACCTCTCTTGTTTCTTATATTCTTGGAGGATTGGTATTTGGTCCATCAATTTTGGGTGACAAAGTGATGCTGACAAAATTCTTATTCCCTATGAAAGGTTCTCTAATACTCAATATAGTGGCAACTTTCTTCCTCGGTTTCTTCTACTTCATATGTTGTGTAAAGATGGATACCGCAGCAATGCTGAAAACAGAAAAACAAGCCATCACAATTGGACTTTCGGTTTTCGTATTCACATTTATAATCCCTCTTGGATTAGCCTTTGCATTGACCAGTTTTGTTGCCATGGACAAATCTCTCATCGAGGCTCTCCCTTTAATAGCCATCTCGCAAAGCTTAACTGTGTTCATCAGCATATCTGTCCTTGTCACAGAGCTAAAAATCCTAAACACAACTGTTGGCCGTCTGGCATTATCATCTGCGATGTTTACCGATGTTTTTAGTTTTTCTATAACAGTATTTATATTTGCAGTATTGCAGGTTAAGACTAGTAATAAGAGTATGCTGACACTAGTATGGATTCTTCTTTCTATAGGCGGAATCATTATTTTAATCATATATGTAATGAGGCCGGTTATGAAATGGTACATTGCACGATTAAACGGAAATCCCGTCAGCGAACTTTGCGTTGTCAGTATCCTTCTATGTGTTCTCTTCGCTGAATTTTTGAGCGAATTCATTGGGCAACGTTTTGTAATGGGAACAATATTTTTTGGCCTAGCTGTTCCTGAAGGGCCGCCTTTAGGATCGACTCTGATATCAAAAATAGAAACGCTTACTTGTGGTTTTATGTATCCAATATACCTTGCTGTCAGTGGATTGCAGACTGATATATTCAAAATCAGCATTCACACTACTTGGATTATAACTGCCGTAGTGATGGTCTCTTTTTTCGTAAAGATCGTTGCTGTTATGTTGCCAGGCTATTATTACAATGTTCCCATGAGAGACTGTTTTGTAATTGGGCTTCTTCTCAATGGCAGAGGTATCGCCGAGCTCGCATTATACAATGTCTGGAAGGAAGGCAAGCAACTAACTGGGCAACAATTCTCTTTATTGGTTCTGACCCTTCTACTGATAAATGCTATCATATCACCACTGGTAAAATTCGTATTTAACCCTTCAGGCCAATATCGTGCTGGAAAAAGATGTTCAATATTACATATGAAGCAAGATTCCGAGCTACGGGTCATGGGATGCTTTTACAAGAATGAAAGCAGCCCAACAATGTTCAACATCATAGAAGCCTCATGTGCAAGCATAGAGAGCAATGTTACTGTTATAGCACTTCTCCTTATAGAGATTCTCGGAAGATCAAGGCCTATTCTCGTCGCTCACCAACCGCATGATACACTTCAAACAACAAGATGTTATTCAGCTCCACTCGACAAAGCATTGAAGCAATATACACAACTGAATGAAGGTTATGCATATGAGGAATCATTCACATCGGTCTCCGACTTCGACACAATCCACGAGGACATCTGTCGAATATCCCTCGATAGAATAGCCAACATTTTGATCATGCCATTCCACAAAAAATGGGAGATAGACGGAACCGTCATGGTAAATAATAAAGCAATCCAAAAAATAAATATTAAAGTCCTTGAAGGCGCTCCTTGTTCAGTCGGAATCCTCATTGATCGAGCTATATTAAGTGGTTCTGCATCGCTATTATTAGGAAAGTCCGCATACTATGTAGCAGTAATCTTCATTGGAGGTCCAGATGATGCCGAAGCACTAGCCTATTCTAATAGAATGGTTCGACACGAGTGTGTGAATGTATCAATTATTAGGTTCCTTATATTTGGAGAAGAGAATTCAAAAGATAGAAAACGTGACAGTGATCTTATATCCGAGTATAGATATTATAACAACGGAAATAGGAGGTTTGAGATAAGTGAAGAAGTTGTGAAAGATGGATTAGAGTTTTCTTCTATAATAAGAAGAATAATAGATTTTTTTGATTTGGTTATTGTAGGGAGGTCACATTCACAATCAGTTTTGTTACATGGACTAGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGTGATATGTTGGCTTCACCAGATTTTGTGACAAAGGCATCATTGTTGGTTGTGCAACAACAGATAATGGGAGGGAGATTCGCTAAACATAGTGTTATGCCAAGTCCAAGGGATCAGGCTGCTGTACGTGATGTTTCAATGGATGATTCAACAATACCTTCTTGTAGTATTTCAGTGGGTAAATCTGACATATAA 2424 0.387 MDIINSTVICTSPPLNTHKSVWQYGNPLSSPTSLLFLQVFVITIVTQFLDICLRPLGQTSLVSYILGGLVFGPSILGDKVMLTKFLFPMKGSLILNIVATFFLGFFYFICCVKMDTAAMLKTEKQAITIGLSVFVFTFIIPLGLAFALTSFVAMDKSLIEALPLIAISQSLTVFISISVLVTELKILNTTVGRLALSSAMFTDVFSFSITVFIFAVLQVKTSNKSMLTLVWILLSIGGIIILIIYVMRPVMKWYIARLNGNPVSELCVVSILLCVLFAEFLSEFIGQRFVMGTIFFGLAVPEGPPLGSTLISKIETLTCGFMYPIYLAVSGLQTDIFKISIHTTWIITAVVMVSFFVKIVAVMLPGYYYNVPMRDCFVIGLLLNGRGIAELALYNVWKEGKQLTGQQFSLLVLTLLLINAIISPLVKFVFNPSGQYRAGKRCSILHMKQDSELRVMGCFYKNESSPTMFNIIEASCASIESNVTVIALLLIEILGRSRPILVAHQPHDTLQTTRCYSAPLDKALKQYTQLNEGYAYEESFTSVSDFDTIHEDICRISLDRIANILIMPFHKKWEIDGTVMVNNKAIQKINIKVLEGAPCSVGILIDRAILSGSASLLLGKSAYYVAVIFIGGPDDAEALAYSNRMVRHECVNVSIIRFLIFGEENSKDRKRDSDLISEYRYYNNGNRRFEISEEVVKDGLEFSSIIRRIIDFFDLVIVGRSHSQSVLLHGLDQWSECPELGVIGDMLASPDFVTKASLLVVQQQIMGGRFAKHSVMPSPRDQAAVRDVSMDDSTIPSCSISVGKSDI 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04374 807 Pfam Sodium/hydrogen exchanger family 41 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04374 807 Gene3D - 33 438 IPR038770 -
Vivi3g04374 807 PANTHER CATION/H + ANTIPORTER 9 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04374 Vivi-Chr3 78700932 78706583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04374 5 780 Antiporter Super Family AT2G13620 33.333 6.40e-147 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04374 K26731 - gmx:100779700 941.414