Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04372 ATGGAAACCGTAAATTCTACAATAATATGCACAAGTCCTCCTCTTAATACTCACAAGAGTGTGTGGCAGCATGGCAACCCACTTTCTTCCCCCACTCCTCTTATCTTCCTTCAGGTCTCTATTATTACTATAGTCACACAATTCTTGGATATTTGTCTCAGACCCCTAGGACAAACCTCTCTTGTTTCTTATATTCTTGGAGGATTGGTATTTGGTCCATCAGTTTTGGGGCACAAAGAGACGCTGACAAAATTCTTATTCCCTATGAAAGGTTCTCTAACACTCAATACAGTGGCAACTTTCTTTCTCGGTTTCTTCTACTTCATATGTTGTGTAAAGATGGATACAGCAACAATGTTGAAAACAGAAAAACAAGCCATCACAATTGGTCTTTCGGTTTTCCTATTCACATTTATAATCCCTCTTGGAATAGCTTTTGCATTGATCAGTTTTGTTGCCATGGACAAATCTCTCATCGAGGCTCTCCCTTTAATAGCCATCTCGCAAAGCTTAACCGTGTTCATCAGCATATCAGTCCTTCTGACAGAGCTAAAAATCCTAAACACAAATGTCGGCCGTCTGGCATTATCATCCGCGATGTTTACCGATGTTTTTAGTTTCTCTATAACAGTATTTATATTTGCAGTATTGCAGGTTAAGACTAGTAATAAGAGTATGCTGACACTAGTATGGATTCTTCTTTCCATTGGAGGACTCATTGTTTTTATCATATATGTAATGAGGCCGGTTATGAAATGGTACATTGCACGATTAAATGGAAAGCCCGTCGGGGAACTTTGCGTTGTCAGTATCCTTCTATGTGTTCTCTTCGCTGAATTTTTAAGCGAATTCATTGGGCAGCATTATGTAATGGGAACAATATTTTTTGGCCTAGCTGTTCCTGAAGGGCCTCCTTTAGCATCGACTTTGATATCGAAAATGGAAACGCTTACTTGTGGTTTTATGTATCCAATATACCTTGCTGTCAGTGGATTGCAGACTGATATATTTAAAATCAGCATTCACACTACTTGGATTATAACTGTCGTAGTGATGGTCTCTTTTTTCGTAAAGATTGTTGCTGTTATGTTGCCAGGCTATTATTACAATGTTCCCATGAGAGACTGTTTTGTGATTGGGCTTCTTCTCAATGGCAGAGGTATCGCCGAGCTCGCGTTATACAATGTCTGGAAGGAAGGCAAGCAACTAACAGGGCAACAATTCTCTTTATTGGTTCTGACCCTTCTACTGATAAATGCTATTATAGCACCACTGGTAAAATTCGTATTTAACCCTTCAGGCCAATATCGTGCTGGAAAAAGATGTTCAATATTACATATGAAGCGAGATTCTGAGCTCCGAGTCATGGGATGCTTTTACAAGAATGAAAGCAGTCCAACAATGTTCAACATCATAGAAGCCTCATGTGCAAGCATAGAGAGCAATGTTACTGTTATAGCACTTCTCCTTGTAGAGATTCTCGGAAGATCAAGGCCTCTTCTCGTCGCTCACCAACCGCATGATACGCTTCGGACAACAAGGTGTTATTCATCTCCCCTCGACAAAGCATTGAAGCAATATACACAGTTGAATGAAGGATGTGGGCATGAGGAATCATTCACATCGGTCTCCGACTTCGACACAATCCACGAGGACATCTGTCGAATATCCCTCGACAGAATAGCCAACATTTTGATCATGCCATTCCACAAAAAATGGGAGATAGACGGAACCGTCGTGGTAAACAATAGAGCAATCCAAACAATAAACATTAAAGTCCTCGAAGGAGCGCCTTGTTCAGTCGGAATCCTAATCGACCGAGCTATATTAAGCGGTTCTCCGTCGCTAATATTAGGAAAGTCCGCATACTATGTAGCAGTAATCTTCATTGGAGGTCCAGATGATTCTGAAGCACTAGCCTATGCTAGTAGAATGGTTCGACACGAGTGTGTGAATGTATCAATTATTAGGTTCCTTATATTTGGAGAAGAGAATTCAAAAGATAGAAAACGTGACAGTGATCTTATATCCGAGTATAGATATTATAACAACGGAAATAGGAGGTTTGAGATAAGTGAAGAAGTTGTGAAAGATGGATTAGAGTTTTCTTCTATAATAAGAAGAATAATAGATTTTTTTGATTTGGTTATTGTAGGGAGGTCACATTCACAATCAGTTTTGTTACATGGACTAGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGGGATATGTTGGCTTCACCAGATTTTGTGACAAAGGCATCATTGTTGGTTGTGCAACAACAGATAATGGGAGGGAGATTCGCTAAACATAGTGTTATGCCAAGTCCAAGGGATCAGGCTGCTGTACGTGATGTTTCAATGGATGATTCAACAATACCTTCTTGTAGTATTTCAGTGGGTAAATCTGACATATAA 2424 0.3985 METVNSTIICTSPPLNTHKSVWQHGNPLSSPTPLIFLQVSIITIVTQFLDICLRPLGQTSLVSYILGGLVFGPSVLGHKETLTKFLFPMKGSLTLNTVATFFLGFFYFICCVKMDTATMLKTEKQAITIGLSVFLFTFIIPLGIAFALISFVAMDKSLIEALPLIAISQSLTVFISISVLLTELKILNTNVGRLALSSAMFTDVFSFSITVFIFAVLQVKTSNKSMLTLVWILLSIGGLIVFIIYVMRPVMKWYIARLNGKPVGELCVVSILLCVLFAEFLSEFIGQHYVMGTIFFGLAVPEGPPLASTLISKMETLTCGFMYPIYLAVSGLQTDIFKISIHTTWIITVVVMVSFFVKIVAVMLPGYYYNVPMRDCFVIGLLLNGRGIAELALYNVWKEGKQLTGQQFSLLVLTLLLINAIIAPLVKFVFNPSGQYRAGKRCSILHMKRDSELRVMGCFYKNESSPTMFNIIEASCASIESNVTVIALLLVEILGRSRPLLVAHQPHDTLRTTRCYSSPLDKALKQYTQLNEGCGHEESFTSVSDFDTIHEDICRISLDRIANILIMPFHKKWEIDGTVVVNNRAIQTINIKVLEGAPCSVGILIDRAILSGSPSLILGKSAYYVAVIFIGGPDDSEALAYASRMVRHECVNVSIIRFLIFGEENSKDRKRDSDLISEYRYYNNGNRRFEISEEVVKDGLEFSSIIRRIIDFFDLVIVGRSHSQSVLLHGLDQWSECPELGVIGDMLASPDFVTKASLLVVQQQIMGGRFAKHSVMPSPRDQAAVRDVSMDDSTIPSCSISVGKSDI 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04372 807 PANTHER CATION/H + ANTIPORTER 9 764 - -
Vivi3g04372 807 Pfam Sodium/hydrogen exchanger family 43 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04372 807 Gene3D - 34 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04372 Vivi-Chr3 78686718 78689505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04372 3 780 Antiporter Super Family AT2G13620 33.871 8.53e-149 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04372 K26731 - gmx:100779700 961.444