Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04354 ATGGAAACTTCTAGAGGCAACGGAACCGTTTCAGTTTCTTTCGATGCCCACGGATTATTGGAAGTTTGCGTCAAAAATGACAGAAACGTTGGCTCCTACGGCATTTTCTTGGGTGATAATCCATTCGATTTCGCTCTTCCTGCCACATTGTTCCAACTCATCGTCATCATCACAATCTCTCAAACGCTTTACTTTCTTCTCCGTCCCTTACAAACCCCCAAATTCATCTGCAGCGTTCTCGGTGGAATTCTGTTGGGGCCATCATTTCTAGGGAGGAATGAAATTTACTGGAAAGCATTATTTCCAGCGAGACAAGCTGATGTTTTAGTAGTGATGTCGATGATCGGAGTTATATACTTTCTGTTCTTTATTGCAATAAAAATGGATCTACTCATGACAGTACGAGCGGCGAAAAGTACGTGGTGGCTCGGGATAATACCTTTCATGGCTTCTTTTATAGTGATGTCGACGTTGATAAATGTTTTCTATTTACCGCAGAATTTTGCGAATCTTAAATTAGAAACATCGCGCTCAGCATTAAGTGCTACGATGTCGTTTAGTAATTTTCCGGTTGTGTCGGAAGCTTTGATAGAATTGAATCTCATAGCAACTGAATTAGGACAGATAGCTTTGTCTTCCGCTACACTTAATGATTGCATACAGTTTTTCATCATAGTGTCGCACCATCTTATGGATACTGGGAAAGTGAAGTATTTAGTTTTAGGTACGTTGAGTTGGGTATTGTTCATGCTTTTCAGTTTTTACATTTTAGGACCGGTTATGAAGATGATTGCACACAGCACGCCGACTGGGAAACCGGTGAAGCGTATTTTTGTTGTGTTTATTCTTCTTGGTGCTTTAGTTATGGCAGGTATAACGGATACAATTGGGGTAACGTTTATTATTGGACCGTTGATTTATGGTTTGGTTATACCGAGTGGACCTCCTTTGGGGACAACATTGGTTGAAAAATGTGAAGTTATTATCTTAGAATTTTTGTTACCTTTCTTCTTTGCTGATGTTGGCATGACCACAAATCTCACCGCACTTCATAGTTGGAAAGAGTTTGTAACTTTGCAACTTATATTATCCGCGGGAGACTTAGCCAAGGTTATTGCTTGCGTGTTGGTTTCTATGACATATAACATTAAGCCCAAACATGGCACGGTGCTTGGACTCATGTTGAACATCAAGGGCATCACTCACCTGATTGCTCTTAGTAAATTAAGGAAACTCAAGATATTGGATGATGAAACATTCAGTCACTTGGTGATTTCTGTGGTGGTTACAACCGGATTCATCACACCTATCATTACAATATTATACAAGCATCGTCCTCGAGCACTAAAGTCATCACACATATACGACGGTCAGATGAGAACAATCCAAAACTCTTCTAGAAATTCAGAGTTGCGCATTATTACTTGTTTACACAACGAAGGAAATGTACGTGGTATCACTACTCTGTTAGAAGTTTGCAACCCAGTTCCAGCAAGCCCGTTAGGTGTCTATGTGATTCACCTCATCGAGCTTTTAGGAAAAAGTGCACCAATTTTGCTTCCAATTAATTACAGACGAAACAAAAAATTACTGTCAGTTAATTACCCCGACACAAACCACATCATGCAAGCATTTGAGAATTACTCTAACAACTCTTCTGGTCCGGTTATTGTTTTACCATATGTCAACGTGGCACCTTATAGGAGTATGCACGATGCTGTTGTCAACTTAGCACAAGACAAAATGGCTGCTCTTATTATAGTCCCTTTTCATGAAAATGACCATATTGATCTCACTGGACACATATCAACTTCAATTCGAAAACTCAACACTAGGTTTCAAGCGCACGTGCCTTGCACGCTGGGGATATTGGTTGATAGATACTCGAGGCTTGGCGTGAGGAATGATCACACGAAACCTTATTTCCATGTAGGGGTATTTTTCGTTGGCGGGCCTGATGACAGAGAAGCATTGGCTTTAGGAATTCGAATGTCGGATAGAGAGAATATGAAGGTGTCTTTGTTTCGGTTCATTGTGATGAATAAAAAAGAACGTCAAATTAAATCTCTATCAGGTAGAGAAATTCCACCAAGTGAGCAAGAACAGGAAGAAATGTTGGACGAAGGTCTAATTGATGAGTTTAAAAGTATGAAATTTGGGATGGGTAATGTTTCTTGGTATGAGGTTGCGGTGGAGGATACAGTAGAGGTAATGAGTGCAATTCGAGGTTTGGAAGGAAACTATGATCTTGTGATGGTTGGGAAGAGACATACTATTGGATCTTTAAAAGATGAAGAAATGGGAAATTTCATAGAGAATGTTCAAATATTAGGGATATTTGGAGATATGTTGTCATCAACAGAATTTTGTATTGGAACGGTTCCTGTTTTGGTGACACAATGTGGTGGGGATAAGAGAGCAATGAGGTTGGATAGAGTAGGTTCAGCTAATGTATCTGAGAAAAGCGTAACTAATGTATCTCAGAAAAGTTTAAATGTTAATAAATAA 2508 0.3951 METSRGNGTVSVSFDAHGLLEVCVKNDRNVGSYGIFLGDNPFDFALPATLFQLIVIITISQTLYFLLRPLQTPKFICSVLGGILLGPSFLGRNEIYWKALFPARQADVLVVMSMIGVIYFLFFIAIKMDLLMTVRAAKSTWWLGIIPFMASFIVMSTLINVFYLPQNFANLKLETSRSALSATMSFSNFPVVSEALIELNLIATELGQIALSSATLNDCIQFFIIVSHHLMDTGKVKYLVLGTLSWVLFMLFSFYILGPVMKMIAHSTPTGKPVKRIFVVFILLGALVMAGITDTIGVTFIIGPLIYGLVIPSGPPLGTTLVEKCEVIILEFLLPFFFADVGMTTNLTALHSWKEFVTLQLILSAGDLAKVIACVLVSMTYNIKPKHGTVLGLMLNIKGITHLIALSKLRKLKILDDETFSHLVISVVVTTGFITPIITILYKHRPRALKSSHIYDGQMRTIQNSSRNSELRIITCLHNEGNVRGITTLLEVCNPVPASPLGVYVIHLIELLGKSAPILLPINYRRNKKLLSVNYPDTNHIMQAFENYSNNSSGPVIVLPYVNVAPYRSMHDAVVNLAQDKMAALIIVPFHENDHIDLTGHISTSIRKLNTRFQAHVPCTLGILVDRYSRLGVRNDHTKPYFHVGVFFVGGPDDREALALGIRMSDRENMKVSLFRFIVMNKKERQIKSLSGREIPPSEQEQEEMLDEGLIDEFKSMKFGMGNVSWYEVAVEDTVEVMSAIRGLEGNYDLVMVGKRHTIGSLKDEEMGNFIENVQILGIFGDMLSSTEFCIGTVPVLVTQCGGDKRAMRLDRVGSANVSEKSVTNVSQKSLNVNK 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04354 835 Gene3D - 47 450 IPR038770 -
Vivi3g04354 835 PANTHER CATION/H + ANTIPORTER 29 800 - -
Vivi3g04354 835 Pfam Sodium/hydrogen exchanger family 54 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04354 Vivi-Chr3 78359525 78362615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04354 34 800 Antiporter Super Family AT2G13620 34.275 4.81e-142 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04354 - - gmx:106794183 1060.06