Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04353 ATGGAGGGGACTGGCAGAGGCAACGGAACCGTCTCAATTTCTTATGATTCTGAGGGAAAGGTTGAAATTTGCGTAAGAAATGATAGAAACGTTGGCTCTTATGGCATTTTTCTTGGAGATAACCCATTTGATTTTGCTCTTCCTGCAACATTGTTCCAAATCATTATCGTCATTACACTTTCTCAATCTCTTCACTTTATTCTCAGGCCATTGCAAACACCCAAATTCATCTGCAGCGTTCTCGGTGGAATTCTTTTGGGGCCATCATTTTTAGGGAGGAGTGAAATTTACTGGAAAGCATTATTTCCTGCAAGACAATCTGATGTTTTAATAGTGATGTCAATAGTTGGACCTATATACTTTTTGTTCTTCGTTGCAGTGAAAATGGATATGTTAATGACTGTAAGAGCCGCAAAAAGTACTTGGCTACTCGGAATAATACCTTATGCGGCTTCTTTTTTGGCTATGTCAACACTATTAAAATTTTTCTATTCACCACGAAATTTCCCGAAAGAATTTGGTGATTCACATGCATCCTTAAGTGCTACAATGTCATTCAGTAATTTCCCTGTCATGACTGAAGCTTTATCAGAACTTAACCTCATGGCAACTGAATTAGGCCAGCTTGCGCTGTCTTCGTCCTCGTTCAACGACTGCATACAATTTGCTGTCATAATAGGACACCATATCACAGACACTGAGGGACTAAAATTCAAATTGTGGGCTATGGTTAGTTGCATAGTGTTCATGGTTTTTTGCTTCTTCGCCATAAAGCCAACGATGAAGATGATTGCACGCAACACACCGTATGGGAAACAAGTGAAACAAATTTATGTTGTGTATATTCTTCTTGGTGTTTTTATCATGTCGGGTATAACTGACACTATTGGGGTAACGTTCATGATTGGACCATTGATGTTTGGTCTGATGATACCAAGTGGACCTCCTTTGGGAACAATATTGGTTGAAAAATGTGAAGTTATCATCTCTGATTTTCTGTTACCTTTCTTCTTTGCTTATGTTGGCATGACCACAAATCTCATTGCACTTTACAGTTGGGAAGAGTTTTTATATTTGCAGTTTATCGTATTTGCGGGCGACGTAGCCAAGGCAGTTGCTTGTGTGTTGGTTTCTATGGTATATAACATTAAGCCCAGACAAGGCATGGTGCTCGGTCTCATGATGAACATCAAGGGCATAACTCACCTTATAGCTATTACAAAATTGAAGAATCTCAAGCTAATGGATGAAGATACATACAGTCACTTGGTGATTTGTGTGGTGGTTACAACCGCAGTCATCACACCCTTTATCAATAAACTATACAAGCCTCGTGATCGAGTACGAAATTCATCAAGCGAATTCGACGAACAGATGAGAACAATCCAAAACTGTTCAAGACATTTAGAGTTTCGCATTGTTACTTGTGTACATAACGAAGGAAGCGTACGCGGTATCACTGCTCTATTAGAAATTTGCAACCCAGTTCCAGAAAGCCCGATATCTGTTTACGTGATTCACCTCGTCGAGCTTTTAGGAAAAAGCGCACCAATTTTGCTTCCAATCAATCACAGGCAGAATAAAAAGTTTCTATCAGTTAATTACCCCGACACAAACCACATCATGCGCGCATTCGAGAATTATGCTAGCAACTCTTATGGTCCGGTTATTGTTTTACCATATGTCAACGTTGCACCTTACAAGAGCATGCACGATGCTGTTATCAACTTAGCACAAGACAAAATGGTTCCTTTTATAATAGTCCCTTTTCATGAAAATGACCAAGTTGATCTCAACGGACACATGGCAACTGCGATTCGAAAACTAAATACTAGGTTTCAAGCTAATGTGCCATGCACGTTAGGAATATTGGTGGACAGATACTCGCGACTTGGAGAGAGTAACGATAGTGATAAATCTTATTTTCATGTTGGAGTGTTTTTCATTGGTGGAGCAGACGACAGAGAAGCATTGGCTTTGGGAATTCGAATGTCGGAGAGGGAAAACATGAAGGTATCTTTGTTTCGGTTTGTTGTGTTGAATAGACAAGAACGTGAAAGTAGTAAATCTCAATCAGGTATAGAAGTTTCGCTAGAGGAGGAGCAAGATGAAATTTTGGATGAAAGTTTAATTGATGAGTTTAAGGGAATGAAATTTGGGAGTGGGAATGTTTGTTGGTACGAGGTTGTGGTGGAGGATGGAGTAGAGGTAATGAGAGCAATTCGTGGTTTGGAAGGAGACTATGATCTTGTGATGGTTGGGAGGAGACATAATATTATATCTTTGAAAGATGAAGAAATGGGAAATTTCATAGAAAATGTTCAAATATTAGGGATATTTGGAGATATGTTATCATCAACAGAATTTTGTATTGGAATGGTTCCTGTTTTGGTGACACAATGTGGTGGGGATAAAAGGGGAGTAAGTACCAAGCTTGATAGACTAGGTTCAGTTAATATTTCTCAAAGGAGTTTAATGTTTAATAAATAA 2490 0.3896 MEGTGRGNGTVSISYDSEGKVEICVRNDRNVGSYGIFLGDNPFDFALPATLFQIIIVITLSQSLHFILRPLQTPKFICSVLGGILLGPSFLGRSEIYWKALFPARQSDVLIVMSIVGPIYFLFFVAVKMDMLMTVRAAKSTWLLGIIPYAASFLAMSTLLKFFYSPRNFPKEFGDSHASLSATMSFSNFPVMTEALSELNLMATELGQLALSSSSFNDCIQFAVIIGHHITDTEGLKFKLWAMVSCIVFMVFCFFAIKPTMKMIARNTPYGKQVKQIYVVYILLGVFIMSGITDTIGVTFMIGPLMFGLMIPSGPPLGTILVEKCEVIISDFLLPFFFAYVGMTTNLIALYSWEEFLYLQFIVFAGDVAKAVACVLVSMVYNIKPRQGMVLGLMMNIKGITHLIAITKLKNLKLMDEDTYSHLVICVVVTTAVITPFINKLYKPRDRVRNSSSEFDEQMRTIQNCSRHLEFRIVTCVHNEGSVRGITALLEICNPVPESPISVYVIHLVELLGKSAPILLPINHRQNKKFLSVNYPDTNHIMRAFENYASNSYGPVIVLPYVNVAPYKSMHDAVINLAQDKMVPFIIVPFHENDQVDLNGHMATAIRKLNTRFQANVPCTLGILVDRYSRLGESNDSDKSYFHVGVFFIGGADDREALALGIRMSERENMKVSLFRFVVLNRQERESSKSQSGIEVSLEEEQDEILDESLIDEFKGMKFGSGNVCWYEVVVEDGVEVMRAIRGLEGDYDLVMVGRRHNIISLKDEEMGNFIENVQILGIFGDMLSSTEFCIGMVPVLVTQCGGDKRGVSTKLDRLGSVNISQRSLMFNK 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04353 829 PANTHER CATION/H + ANTIPORTER 30 800 - -
Vivi3g04353 829 Pfam Sodium/hydrogen exchanger family 55 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04353 829 Gene3D - 48 452 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04353 Vivi-Chr3 78355158 78358655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04353 31 800 Antiporter Super Family AT2G13620 34.483 7.26e-145 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04353 - - gmx:106794183 1017.68