Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04337 ATGAGAGAATGGAAATTCACCTGCTTCAAGGATCTTAGGAGAGTTTTGTGGCTTGTGTTGGTTTGTGTTTTGTTACAGAGTTTTGGTTTGTGTTGTTCTTTGAATGATGAAGGTAAAGCTCTTTTGAAGTTCAAGCAAGGAATTGTTAGTGATCCTTTTGGTGCTTTGTCGAATTGGGTTGACGATGGAGTTTGGGTTGACCCTTGTAATTGGTTTGGAGTTGAGTGTTCTGATGGAAGAGTGGTGGTATTGAATTTGAAAGACCTTTGTCTTGAAGGAAAACTTGCACATGAGCTTGAGAGCCTTTTTCACATAAAGTCCATAGTTTTGCGGAATAACTCTTTTCACGGAATCATTCCCGAAGGAATTGTACGCTTGAAGGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGCGGACCTCTAATGAAAGATACTGGGATTAATGTCTCACTAACAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTGTCGCATGATATTAATGAATTGGCGATGATTTCTGAGTCTCAAGTCGATGAAAACCAGCTAATTAGAGCAGGAAAATTGCCAGGTTGTATGGGAAGGTCCATCAAATGGCGTAATCGAAAAAGTGAAAAAAGTCTTCGGAAGCTACTGCAATCAAGTACTCCTCGTGGTGATCCTCATAATCGTGCGGCTATTGTTCCAGATAGTCCTTCTCCTTCTCCATCTCCTTCACCTTCACCTTCCCCTTCTCCTTCGCCGTCTACCACAACAACACCGCCAAAAGTAAAAAAACCATCTTCCCCTGATCGAAATGTTTCCAGTTCTCCTTCTGCCTCGCCCACACCACAATCCAAAAGTACCTCATCCAAGAAAGATCACACGCCTATTGTGGTTGGAATTGTGGGCGGTGTTGCATTTATTCTCATTTCAATCGTTGTCGTATATCTCTGGAAAACCAACAAGGTAGCCACCGTTAAACCATGGGCTACGGGATTAAGTGGACAGCTTCAGAAAGCATTTGTGACAGGCGTGCCGAAGCTAAAGAGATCAGAGCTTGAAGCAGCGTGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGAAGCATTTACACGGTGTACAAAGGGACTCTATCTAGCGGTGTCGAAATAGCCGTGGCTTCTGTTACAGTGACATCGTTGAAAGATTGGTCAAAGACTTCAGAAGTCCAATTTCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTCGTAAATCTTCTTGGATTTTGCGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAATACGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCCGAGCATTTGGATTGGGCAACAAGACTTAGAGTTACAATTGGCACGGCTTACTGCCTGCAACATATGCACCAGTTAAACCCTCCGCTCGCCCATAGCAACCTAAACTCTTCATCTGTTCAACTAACCGACGACTACGCTGCCAAAATCTCCGACTTAAGTTTCTTGAAAGAAATAGTTTCAGCCGATACAAAATCTGCTGCTAAGAAACACGCGGACGCAACATTAGCAAGTAACATTTACAGCTTCGGTATCATGTTACTCGAAACTGTAACGGGCCGTCTTCCTTATTCCAACGATCAAGACGGTTCACTCGAAAATTGGGCTTCACACTATCTACAAGGGAACCAGTCTCTCAAAGAAATAGTCGATCCAACACTAGTATCCTTCCAAGAAGAACAATTAGTACAAATCGGCGCATTGATTAAGTCCTGTGTTAATTCTGATCAAGAGCAAAGACCAACAATAAAACAAGTTTGCGAGAGATTAAGAGAGATAACGAAAATAAGTCCCGACGTAGCAGTTCCAAAACTTTCACCACTTTGGTGGGCAGAACTCGAGATTGCTTCTTTCGATGCCAGCTGA 1950 0.4221 MREWKFTCFKDLRRVLWLVLVCVLLQSFGLCCSLNDEGKALLKFKQGIVSDPFGALSNWVDDGVWVDPCNWFGVECSDGRVVVLNLKDLCLEGKLAHELESLFHIKSIVLRNNSFHGIIPEGIVRLKELEVLDLGYNNFSGPLMKDTGINVSLTILLLDNNDLLCGLSHDINELAMISESQVDENQLIRAGKLPGCMGRSIKWRNRKSEKSLRKLLQSSTPRGDPHNRAAIVPDSPSPSPSPSPSPSPSPSPSTTTTPPKVKKPSSPDRNVSSSPSASPTPQSKSTSSKKDHTPIVVGIVGGVAFILISIVVVYLWKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGSIYTVYKGTLSSGVEIAVASVTVTSLKDWSKTSEVQFRKKIDTLSKMNHKNFVNLLGFCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWATRLRVTIGTAYCLQHMHQLNPPLAHSNLNSSSVQLTDDYAAKISDLSFLKEIVSADTKSAAKKHADATLASNIYSFGIMLLETVTGRLPYSNDQDGSLENWASHYLQGNQSLKEIVDPTLVSFQEEQLVQIGALIKSCVNSDQEQRPTIKQVCERLREITKISPDVAVPKLSPLWWAELEIASFDAS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04337 649 Pfam Protein tyrosine and serine/threonine kinase 369 618 IPR001245 GO:0004672|GO:0006468
Vivi3g04337 649 MobiDBLite consensus disorder prediction 235 257 - -
Vivi3g04337 649 PANTHER PROTEIN MALE DISCOVERER 2 13 645 - -
Vivi3g04337 649 Gene3D Transferase(Phosphotransferase) domain 1 442 629 - -
Vivi3g04337 649 Gene3D Phosphorylase Kinase; domain 1 328 441 - -
Vivi3g04337 649 MobiDBLite consensus disorder prediction 199 291 - -
Vivi3g04337 649 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Vivi3g04337 649 SUPERFAMILY L domain-like 32 172 - -
Vivi3g04337 649 FunFam Inactive receptor-like serine/threonine-protein kinase 330 441 - -
Vivi3g04337 649 ProSiteProfiles Protein kinase domain profile. 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04337 649 SUPERFAMILY Protein kinase-like (PK-like) 343 618 IPR011009 -
Vivi3g04337 649 MobiDBLite consensus disorder prediction 258 291 - -
Vivi3g04337 649 FunFam Leucine-rich repeat receptor-like kinase 37 155 - -
Vivi3g04337 649 Gene3D Ribonuclease Inhibitor 35 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04337 Vivi-Chr3 78067588 78071107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04337 16 621 Receptor kinase-like Gene Family AT1G66830 26.496 1.42e-42 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vivi3g04337 PK_Tyr_Ser-Thr 2.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04337 - - psat:127084000 1093.57