Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04329 ATGGGAAGTTCGGTGCGTGTTAAAGAAGCTGTTGTGGTGACCCCTTCAGAGCCCACACCAAACTGTGTTATGTTACTTTCCCCTCTAGACTCTCAACTTTTTCTCCGCTTCACCATTGAATATCTTTTAGTTTACAAGCCCGGCCCGGGCCTCGACAGGGTTACAACCACTGCTCGTTTAAAGGCTGCATTAGCTAAAGCTCTGGTTCCTTATTACCCATTGGCCGGAAGAATCCGGCCCATCCAAAATAGCACTGGTCTTGAGGTTGTTTGTCGAGCGCAAGGCGCGATTTTCATCGAAGCGGTTAGTGATCGTTACACTGTCAACGAATTCGAGAAAGTTCCAAAAACGGTTTTGCAATGGAGGAAGCTCTTGTCCCTTAGTGTTCCCGATGTTCTCAACGGATCGCCACCGCTGATTCTTCAGCTGACATGGTTATCCGACGGTGGTGCAGCTTTAGGAATTGGGATTAATCACTGCATCTGCGACGGGATCGGTGGGGCGGAGTTTCTCAATTATGTCGCGGAGTTGGCTTCGGGAAGACGAGGATGTCCAAAACCGAAAGCTGTTTGGGATCGTCATGTGTTCAATGTGAAACCTATGACTCGGGGTGACTCTGCGAGTCACCCTGAGTTCAACCGAGTAGCAGATCTATGCGGGTTCATGAACCGTGTCACGAATAATCTAAAGCCAACTTGTGTTTTATTCGATAAGAGACGGTTGATCGAACTCAAAGGTGTGGCTCGACGCACGTGTCAAATCGTTGACTCGTCGTTTACGTCGTTTGAGGTTCTCGCAGCACACGTGTGGAGGAGCTGGGCGAGAGCAATGGTGTTCCCGCCGAACCAGATACTTAAGCTGTTATTCAGCGTGAATGTGAGGAACCGGTTCAAACCGGGTTTGCCCGATGGATACTACGGAAATGCGATTGTAATGGCGTGCGCGCAGGCGAGTGCGAGGGAACTGGGAGAGAGAGGAATCGGGTACGGGTCGGGTTTGGTGAAGAAAGCAAAGGAGAGGGTGGATAGTGAATATGTGAAGAGGGTGGCTGAGTTGGTGTCCGAGTCAAGAGCGAGTCCTGACTTGGTGGGTGTGTTGATACTGACGCAGTGGTCGAGGATGGGTTTGGACCGAGTTGAGCTTGGTATGGAGAAGCCGGAGTTTGTGGGGCCCATTTGCAATGAAAGGTACTGTTTGTTTGTGCCGGTGAAGGGTGAAAGAGACAGCGTCAAGGTCATGGTGGCTGTTCCTGCCGCCGCTTTTGATAATTACCATCGTTTTCTCCGGGAATAG 1293 0.5066 MGSSVRVKEAVVVTPSEPTPNCVMLLSPLDSQLFLRFTIEYLLVYKPGPGLDRVTTTARLKAALAKALVPYYPLAGRIRPIQNSTGLEVVCRAQGAIFIEAVSDRYTVNEFEKVPKTVLQWRKLLSLSVPDVLNGSPPLILQLTWLSDGGAALGIGINHCICDGIGGAEFLNYVAELASGRRGCPKPKAVWDRHVFNVKPMTRGDSASHPEFNRVADLCGFMNRVTNNLKPTCVLFDKRRLIELKGVARRTCQIVDSSFTSFEVLAAHVWRSWARAMVFPPNQILKLLFSVNVRNRFKPGLPDGYYGNAIVMACAQASARELGERGIGYGSGLVKKAKERVDSEYVKRVAELVSESRASPDLVGVLILTQWSRMGLDRVELGMEKPEFVGPICNERYCLFVPVKGERDSVKVMVAVPAAAFDNYHRFLRE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04329 430 Gene3D - 2 214 IPR023213 -
Vivi3g04329 430 Gene3D - 222 427 IPR023213 -
Vivi3g04329 430 Pfam Transferase family 4 421 - -
Vivi3g04329 430 PANTHER ACYL TRANSFERASE 4 4 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04329 Vivi-Chr3 77822797 77824431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04329 5 430 Monolignol Biosynthesis Gene Families AT5G48930 26.932 7.55e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04329 - - psat:127083994 799.275