Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04313 ATGGCAAAAACAAAACACCTTCCGTCACCCCTCAAAGTACCACCCTCTGCCTCTTCCTCCGAGGAAGATTCTTCCGAAGAAGAAGCTGAGGTACCTCAATCCAAAAACCCTCCACCTCTTGCTTCCCAAAACCCTCCATCAGCTACTTCAAACTCAAACCCTAAACCATCATCATCATCTTCTGAATCCGAATCTGGGTCAGATTCTGAATCCGAAACCGAAACCGATTCTTATTCGGAACCAGAACCCACTCCACCTGTGAAACCACTTGCATCAAAGCCGTTAAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCATGCTATCGAGTTTCAAACCACTAGAACCAAGCATGCGGTTGATAACAACGACACTGACTCTGACTCTTCTAAGCGTTTGAAGAAGAAAGCAAACAAAACTGAACGTCGTGGTTCCGTTGACGAGAAGGAAGCGGCGAGAGACTCTATCAAAAAGATGTCGGCTCAGAGACTATTCAGCGAGGAAGACGAACTCGCCATTCTGAAAGGTCTAGCTGATTCCATTTCAACTAAAAAGGATCCTTTGAAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGTTGACGCAAACAAAGGTCAACTTAGGCATAAGGTTCTTGCTCTAAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTATCAAGAAGATTGAGTTTAAAAAACAGAGAACACCAAAAAAGGGCTTGAGTTCGGATTCTGTTTCTGCAAAAGAAGTATTAGTTGCAAAGAAGGAAGATACTGTGAAAAATGTTAAAAACAGTTTGGCTTTTAAGGAAATGTCTAGGTTTGGTGATGATAATAAAAAAAATGCTATGTTAGAAGAAAAATGGAAGAAGGTTCAGATTGTTGAGAATAAGTTGTTTATGACTCGAGCGGGGCTGGTTAGAGAACAAGCTAGCATGATACTGGAGTCTTTAGTTTTACTTTGGATGCATATAAGACATCAAACCTTTTGGTATAGTTTTTTTGCAGGTTTTTAA 1071 0.3996 MAKTKHLPSPLKVPPSASSSEEDSSEEEAEVPQSKNPPPLASQNPPSATSNSNPKPSSSSSESESGSDSESETETDSYSEPEPTPPVKPLASKPLKILTTPSPAKAGTKHAIEFQTTRTKHAVDNNDTDSDSSKRLKKKANKTERRGSVDEKEAARDSIKKMSAQRLFSEEDELAILKGLADSISTKKDPLKNTQAFYNFVKNSIRVDANKGQLRHKVLALKKKFERNDENFTKEHDQKAFELIKKIEFKKQRTPKKGLSSDSVSAKEVLVAKKEDTVKNVKNSLAFKEMSRFGDDNKKNAMLEEKWKKVQIVENKLFMTRAGLVREQASMILESLVLLWMHIRHQTFWYSFFAGF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04313 356 MobiDBLite consensus disorder prediction 1 157 - -
Vivi3g04313 356 MobiDBLite consensus disorder prediction 114 157 - -
Vivi3g04313 356 PANTHER BNAANNG10740D PROTEIN-RELATED 53 334 IPR007592 GO:0006355
Vivi3g04313 356 MobiDBLite consensus disorder prediction 45 66 - -
Vivi3g04313 356 Pfam Protein of unknown function, DUF573 165 247 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04313 Vivi-Chr3 77341376 77342495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04313 4 247 GeBP Transcription Factor Family AT1G61730 33.077 1.10e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi3g04313 DUF573 8.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04313 - - vvo:131658367 607.831