Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04311 ATGAAGAAACCACCGTCTTCCACCGTCATCACATATCTCATCACCGTCACAGCTTTAATTATCCTCCATCTTTCACCGTTTTCCCATGCTTTAGGCTCCGGCACTACCATCGCCGTCACCGACTCACCTGCCACCGTCTGCGGCATCGTATCGGGCCAGTCAATACAAAACATTCAGTGTTACCGTCAAGGACAAGTCTCCTCCTTCCCCGTCTCTCCCAACGTTTCGTTCTCTTCAATCTCCGGCGGGAAGAGCTACTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTACATTGTTGGGATAGTTCGTCTTCGTTTCAAAGTAAAAGACTTTACTTTAACGACTCTGTTTTGTTAGAGAATCTCGCTGTCGGAGATTCCCAGGTTTGTGCCACGGTGGTCGGAGTTGGAACGGTTCGATGCTGGAGAACCGGCAACGATTTTGAACCATCTGGGTCGGATCGGTTTGGTTCGATTTCATCTGGGTCGGGGTTCTCTTGTGGGATATTGAAAAATGGTTCACAAGTTCGGTGTTGGGGAGAGAAAACTGTTGCGGAAGGGTTACAGAATGGGTTTGGGAACATGTCTATGTTGAGTATGGTAGCTGGGGGGTCACATGTTTGTGGTTTGAATTCAGCTGGTTTTTTGGTTTGTAAAGGAAGTAACAGTTCTGGACAACTTGATGTTCCACAAGGTGGTGCTTTTGAGTTTGGTGAATTGGCACTTGGAGATGAACATGGTTGTGCTATTAGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAAGGGTCAATTTTTGGTGAATTCTATTGAATCCTTTGAGTTAATTGTTTCTGCTTCGAATTTTACTTGTGGATTGACTACAACTAATTTTTCGGTTATTTGTTGGGGACCTGGTTGGTCTAATGGATCAAATGGTTCTGAATCTGTTATTCCTTTGTCTCGGATTCTTCCCGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGAATTTATCCTGATTCGCAATCATTGTGTTCTAGCATGAGTCGTCACATTTGCAAGGCGAATATATGTAATACTCAAATAACAAATCCGCCGCCGCCTCCGCCAGTTCAACCTCCACCTCCGGTATCTCCTCCTCGATCGTCTCGATCGAAGACATTGACGAGAGGCTTATTGGCGTTCGCAATTGTTGGATCAGTTGGTGCTTTTATTGGTGTATGCTCAATAGTTTATTGCTTATGGAAAGGTGCTTGTTTTGGTAAAAAGAAAGTTCATAATTCTGTGCAACCAACAATAACAAGAGGTAGTAGCAACAGTTCAAATACCAGCACATCTTCGATTAAATCGGCCATTATGCGTCAAGGTTCAAGAATAATGAGGCGACAGAGGAGTGGACCTTCGACAACAAAGCATCAAGAAAGGGCAGAAGAGTTTACTCTCTCCGAGCTTATAGCAGCTACCGACGGTTTCTCATTCCAGAACAAAATTGGTGCGGGAAGTTTCGGTATTGTGTATAGAGGAAAACTAACAGATGGTAGCGAGGTAGCTATTAAAAGAGGCGAAACAGGTTCCAAGGTTAAAAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTATCCTTTTTGTCGCGGTTACACCACAAACACTTGGTTAGACTAGTTGGTTATTGCGAGGAGAAAGACGAGAGGCTTTTGGTTTACGAGTACATGAAGAATGGTTCGTTGCATAGTCATTTACATGATAAGAACAATGTAGAAAAAAGTAACAGTTTGTTGAACTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCAAGAGGAATAGAGTATCTGCACAACTATGCAGTTCCTTCAATAATTCATAGAGATATCAAGTCTTCGAATATTCTTCTTGACTCAACTTGGACAGCGCGAGTATCTGATTTCGGATTGTCACTGATGAGTCCAGAAGCTGATATCGATTACAAACCAACAAAAACAGTAGGAACGGTCGGTTATATCGATCCCGAGTACTATGGTTTGAATTTATTAACAGCAAAAAGCGATGTATATGGACTCGGAGTCGTATTACTCGAATTATTAACAGGAAAACGAGCTATATTTAGAAACGGTGAAGACGGAGGAAATCCATTGAGTCTAGTTGATTTCGCAGTGCCTGTTATTTTGGCCGGTGAATTGACGAAAATCTTGGACTCAAGAGTTGGATCACCGCGGGAGAGTAACGAATCGGAGGCGGTCGAGTTGATGGCGTATACGGCCGTGCATTGCGTGAATTTGGAAGGGAAAGACAGACCGACGATGGCTGATATCGTTGCGAATTTGGAGAGAGCATTGCTTATTTGTGAGGGTGATAGTAACAATGAGATTGAAAGTATTTCCAGTGTTACTATCTCTGTTGTTTCAGATTGA 2403 0.4299 MKKPPSSTVITYLITVTALIILHLSPFSHALGSGTTIAVTDSPATVCGIVSGQSIQNIQCYRQGQVSSFPVSPNVSFSSISGGKSYFCGLRSGNYSLHCWDSSSSFQSKRLYFNDSVLLENLAVGDSQVCATVVGVGTVRCWRTGNDFEPSGSDRFGSISSGSGFSCGILKNGSQVRCWGEKTVAEGLQNGFGNMSMLSMVAGGSHVCGLNSAGFLVCKGSNSSGQLDVPQGGAFEFGELALGDEHGCAIRRLNGSVVCWGGKGQFLVNSIESFELIVSASNFTCGLTTTNFSVICWGPGWSNGSNGSESVIPLSRILPGPCVQSSCSECGIYPDSQSLCSSMSRHICKANICNTQITNPPPPPPVQPPPPVSPPRSSRSKTLTRGLLAFAIVGSVGAFIGVCSIVYCLWKGACFGKKKVHNSVQPTITRGSSNSSNTSTSSIKSAIMRQGSRIMRRQRSGPSTTKHQERAEEFTLSELIAATDGFSFQNKIGAGSFGIVYRGKLTDGSEVAIKRGETGSKVKKFQEKESAFESELSFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGSLHSHLHDKNNVEKSNSLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPEADIDYKPTKTVGTVGYIDPEYYGLNLLTAKSDVYGLGVVLLELLTGKRAIFRNGEDGGNPLSLVDFAVPVILAGELTKILDSRVGSPRESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGDSNNEIESISSVTISVVSD 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04311 800 ProSiteProfiles Protein kinase domain profile. 486 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04311 800 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 194 783 IPR044815 GO:0004674
Vivi3g04311 800 MobiDBLite consensus disorder prediction 359 376 - -
Vivi3g04311 800 MobiDBLite consensus disorder prediction 425 448 - -
Vivi3g04311 800 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Vivi3g04311 800 Gene3D Transferase(Phosphotransferase) domain 1 567 791 - -
Vivi3g04311 800 Pfam Protein kinase domain 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04311 800 SUPERFAMILY RCC1/BLIP-II 25 262 IPR009091 -
Vivi3g04311 800 MobiDBLite consensus disorder prediction 359 380 - -
Vivi3g04311 800 Gene3D - 28 194 IPR009091 -
Vivi3g04311 800 Gene3D - 195 344 IPR009091 -
Vivi3g04311 800 FunFam serine/threonine-protein kinase-like protein CCR1 455 566 - -
Vivi3g04311 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi3g04311 800 SUPERFAMILY Protein kinase-like (PK-like) 464 772 IPR011009 -
Vivi3g04311 800 SMART serkin_6 486 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04311 800 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Vivi3g04311 800 MobiDBLite consensus disorder prediction 425 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04311 Vivi-Chr3 77213595 77216316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04311 1 800 Receptor kinase-like Gene Family AT3G55950 57.024 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vivi3g04311 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04311 - - gmx:100786639 1074.69