Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04303 ATGGCTTTCAGGGCCAGTGGAACACTCATTTTGGCTTGTCTCGTTTGGATTTTCTTCCTCTGTGCAACCATTGCATTCTTTCAGCTCAAATTGGTTGACAACACAACCCATCAAGCTTCTTCTGACGACAAGTTAACCACAACGCAAAATCATCATCAACCAGATACCCTTTTGGAAGATGATTTGGAGGGTGTGACCCATAAAGTGTATTTTGACATAGAGATCGATGGGAAATTATCGGGTCGCATAGTCATGGGACTTTTTGGGACCACAGTTCCAAAAACTGCAGGAAACTTCCGTGCGCTTTGTACAGGAGAGAAAGGGGTGGGAAGAAGTGGGAATCCTCTTCATTATAAAGGGAGCGCATTCCATAGGATAATACCAAGCTTCATGGTCCAAGGGGGTGATTTCACAAGTGGCGATGGAAGAGGCGGAGAATCAATCTATGGTGATAAGTTTGCCGACGAAAATTTCAAGATCAAGCATACCGGGCCAGGATACTTATCAATGGCAAATTCTGGGCAAGACACCAATGGCTCTCAGTTTTTTATAACAACAGTAAAAACCAGCTGGCTTGATGGGCGGCATGTTGTATTCGGCAAGGTACTTTCTGGTATGGATGTTTTGTACAAGATTGAAGCAGAAGGAAGTGAAGGTGGCTCTCCCAAACGCAAGGTTGTCATATTAGACAGTGGGGAATTGACTTCATGA 711 0.443 MAFRASGTLILACLVWIFFLCATIAFFQLKLVDNTTHQASSDDKLTTTQNHHQPDTLLEDDLEGVTHKVYFDIEIDGKLSGRIVMGLFGTTVPKTAGNFRALCTGEKGVGRSGNPLHYKGSAFHRIIPSFMVQGGDFTSGDGRGGESIYGDKFADENFKIKHTGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLYKIEAEGSEGGSPKRKVVILDSGELTS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04303 236 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 70 233 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 FunFam Peptidyl-prolyl cis-trans isomerase 63 235 - -
Vivi3g04303 236 Gene3D - 57 236 IPR029000 -
Vivi3g04303 236 SUPERFAMILY Cyclophilin-like 65 234 IPR029000 -
Vivi3g04303 236 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 70 230 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 118 135 IPR020892 GO:0003755|GO:0006457
Vivi3g04303 236 CDD cyclophilin_ABH_like 67 232 - -
Vivi3g04303 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 234 - -
Vivi3g04303 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 87 102 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 193 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Vivi3g04303 236 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 194 209 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04303 Vivi-Chr3 77149355 77152633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04303 81 231 U-box Gene Family AT5G67530 41.830 4.40e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04303 K01802 - gmx:100792649 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04303 3 77149355 77152633 Vivi3g04303 3 77149355 77152633 ECH